Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1447 ATGCGAAGCTGCGTCAACTTGTGGATCGTGGTGGCACTCGTCGTACCCGTGCTCCTCTCTCTCAGAAATCCACGAGGCGAAACCGAAACCGAAACCGAAACTCAAACTCAAACCCAAAAACAAACCACTTCGTCTTCTTTCTCTGATTCTTCTTCCTTCTCAGTGAAGCTTGCAAACACGTTCCCCTTCAACGAAAGGATCCGAGACGGGTCCAATCTCGAATACGATTTCTACAGGGACACGTGTCCCCAAGCGGAGGGCATTGTCCGTTCGGCGCTCACGCGCATCTACTTCGACCGCAGGGACGTTGCACCTGCTCTGCTGCGTCTCTTCTTCCACGATTGCTTCATCCAGGGGTGTGATGCTTCGTTGCTGTTGGATGAGAACAATGGTGATAGAAACCGCTCAGTGGAGAAGCAGGCTGTGCCAAATCAGACGTTGAGAGGTTTTGACAAAATTGACTTGATTAAGGAGGAGGTGGAGCAAGCATGTCCTGGGGTTGTGTCTTGTGCTGACATTCTTGCTCTTGCAGCAAGGGATTCCGTTCTTCTGGCTGGTGGGCCTTTCTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTGCATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTAGGAGGACACAACATTGGCAAAATTGGTTGTGATTTTATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATACCCCTTGATTTCCTTCGTCAGATGAGGCTAACCTGCCCAGACAACAAGAACATTAGCAGCAGCGATGATGAGTTTGTGGCTTCAGACGTAAGTGATGATGAGTTTGTGACTTCAAAGCCAATGAATAGTGATCTTCACTCTAAAGTGGGGATGTCATACATGCAGGCACTGTCATCTTCAGTGCCATCAGGAGCAGCATTTGACACTCACTACTACCAGAGCCTGCTTAGCGGAAGAGGACTACTTTTTGCTGATCAGCAGCTGATGGCTGAGGAGAAGACTGCCAGATTGGTCTCTGCTTATGCTTCGGATGATGGATCAACCTTTCGCATGGATTTTGCCAGGGTCATGTTGAAAATGTCTAATCTTGATGTTCTGACCGGACTTCAAGGTCAGGTCCGTCTCAATTGCTCCCAACCTGTGACTTCTTAA 1239 0.4835 MRSCVNLWIVVALVVPVLLSLRNPRGETETETETQTQTQKQTTSSSFSDSSSFSVKLANTFPFNERIRDGSNLEYDFYRDTCPQAEGIVRSALTRIYFDRRDVAPALLRLFFHDCFIQGCDASLLLDENNGDRNRSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSVLLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLTCPDNKNISSSDDEFVASDVSDDEFVTSKPMNSDLHSKVGMSYMQALSSSVPSGAAFDTHYYQSLLSGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSQPVTS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1447 412 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Ssu8g1447 412 ProSiteProfiles Plant heme peroxidase family profile. 72 410 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 Gene3D - 390 407 - -
Ssu8g1447 412 PRINTS Plant peroxidase signature 327 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 384 397 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 186 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Plant peroxidase signature 343 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PANTHER PEROXIDASE 77 407 - -
Ssu8g1447 412 Gene3D Peroxidase, domain 2 331 389 - -
Ssu8g1447 412 MobiDBLite consensus disorder prediction 30 51 - -
Ssu8g1447 412 Gene3D Peroxidase, domain 2 212 299 - -
Ssu8g1447 412 SUPERFAMILY Heme-dependent peroxidases 73 408 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 CDD secretory_peroxidase 72 407 IPR033905 GO:0004601|GO:0042744
Ssu8g1447 412 MobiDBLite consensus disorder prediction 25 51 - -
Ssu8g1447 412 Gene3D - 77 211 - -
Ssu8g1447 412 PANTHER PEROXIDASE 25-RELATED 77 407 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 Pfam Peroxidase 89 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Haem peroxidase superfamily signature 329 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1447 412 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1447 Ssu-Chr8 28107933 28110822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1447 55 408 Peroxidase AT4G33870 45.257 1.66e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1447 K00430 - gmx:100804973 684.485