Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1418 ATGTTCTGTTATGAACCAATCAAACAGATTATTGAACTCTGCATGAATAACCAGAGGGATGAGTTGTGGCCCAAGTTGCAAAAGCTTGGGGTGAACTTGAAGTCAGAGGAGAAGGAGTTGACGGGAAAGGCTTTGATGAAGCGTGTTATGCAGAGCTGGCTCCCGGCAAGTGGTGCCCTTCTGGAGATGATGATATTTCACCTTCCCTCTCCCGCCAGTGCTCAAAAGTATCGCGCTGAGAATTTGTATGAGGGTCCCCTTGATGATCCTTACGCTTCGGCTATCAGAATTTGTGACCCTGAAGGACCTCTAATGCTCTACGTCTAA 327 0.474 MFCYEPIKQIIELCMNNQRDELWPKLQKLGVNLKSEEKELTGKALMKRVMQSWLPASGALLEMMIFHLPSPASAQKYRAENLYEGPLDDPYASAIRICDPEGPLMLYV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1418 108 Gene3D Translation factors 71 108 - -
Ssu8g1418 108 Gene3D Yeast translation eEF2 (G' domain) 1 54 - -
Ssu8g1418 108 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 2 108 - -
Ssu8g1418 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 69 IPR027417 -
Ssu8g1418 108 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1418 Ssu-Chr8 27185758 27186084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1418 2 108 Eukaryotic Initiation Factors Gene Family AT1G56070 78.505 8.29e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1418 K03234 - pda:103721885 194.126