Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g1417 | ATGGGAAAGAAACAGGAAACCGTTGAGGATGTGCCTTGTGGCAACACAATAGCTATGGTAGGTTTAGACCAATTCATCACCAAGAATGCTACGTTGACAAACGAGAAGGAAGTCGACGCACACCCCATTCGAGCTATGAAGTTTTCTGTTTCGCCGGTGGTAAGTGTTGCTGTGACAAGCAGGGCTGCATCGGATCTTCCGAGGCTTGCTGAAGGCCCACATCGTTTAGCCAAGTCAGACCCCACTGCACAATCTGAGAGACAGGAGAGCATATAA | 276 | 0.4891 | MGKKQETVEDVPCGNTIAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVSVAVTSRAASDLPRLAEGPHRLAKSDPTAQSERQESI | 91 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g1417 | 91 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 82 | - | - | |
Ssu8g1417 | 91 | PANTHER | TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT | 1 | 82 | - | - | |
Ssu8g1417 | 91 | MobiDBLite | consensus disorder prediction | 63 | 91 | - | - | |
Ssu8g1417 | 91 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 50 | 91 | - | - | |
Ssu8g1417 | 91 | SUPERFAMILY | Translation proteins | 1 | 42 | IPR009000 | - | |
Ssu8g1417 | 91 | Gene3D | Translation factors | 1 | 49 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g1417 | Ssu-Chr8 | 27185319 | 27185594 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g1417 | 1 | 90 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 80.000 | 3.82e-44 | 149 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g1417 | K03234 | - | csv:101209544 | 132.494 |