Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1417 ATGGGAAAGAAACAGGAAACCGTTGAGGATGTGCCTTGTGGCAACACAATAGCTATGGTAGGTTTAGACCAATTCATCACCAAGAATGCTACGTTGACAAACGAGAAGGAAGTCGACGCACACCCCATTCGAGCTATGAAGTTTTCTGTTTCGCCGGTGGTAAGTGTTGCTGTGACAAGCAGGGCTGCATCGGATCTTCCGAGGCTTGCTGAAGGCCCACATCGTTTAGCCAAGTCAGACCCCACTGCACAATCTGAGAGACAGGAGAGCATATAA 276 0.4891 MGKKQETVEDVPCGNTIAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVSVAVTSRAASDLPRLAEGPHRLAKSDPTAQSERQESI 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1417 91 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 82 - -
Ssu8g1417 91 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 1 82 - -
Ssu8g1417 91 MobiDBLite consensus disorder prediction 63 91 - -
Ssu8g1417 91 Gene3D Elongation Factor G (Translational Gtpase), domain 3 50 91 - -
Ssu8g1417 91 SUPERFAMILY Translation proteins 1 42 IPR009000 -
Ssu8g1417 91 Gene3D Translation factors 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1417 Ssu-Chr8 27185319 27185594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1417 1 90 Eukaryotic Initiation Factors Gene Family AT1G56070 80.000 3.82e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1417 K03234 - csv:101209544 132.494