Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1400 ATGGTGGATATGGATGGGTTTGGAGCTGGGGGTGGTGTTGATGGAGCTCCCAACGCAGAGAATCTCAGGGAATTGGGGAATGTTCCCTCAGAAGGTGCAGTTTTTGACGCATCGCAATATGCATTCTTCGGTAAGGATGTTGTCCAGGAAGTTGAGTTGGGAGGGTTGGAAGATGATGTCTGTTTGCCTACTGTTGAGTCTAATGAGGAGGAGTTCTTTTTCAATAGAGAAGAGGCTGAGGATGTAAGGTCTCTTTCTGATATTGATGATCTTACTACCACTTTTTTGAAGttGAACAAGTTCGTGAGTGGACCAAGAAGTGCAGGTGTTATTGGTGAACGAGGATCAAGAGAAAATTCTACTTCTGAATGGTCACAAAGGGAAGATAGTCTTAACTGGTTTGATCAGAATGCTTATGATAGTGAAGGTTCTACGGATGGCCAAAGATGGTCATCACAGCCCCATTCTTCCCTAGCCCATTTACATGATTCAAAGCCCTTGTACAGAACATCTTCATATCCTGAGCAGCAAAGGCAGGAGCAACACTACCACCTCCAACATTGCTCTAGTGAACCAGTTCCTAACTGGCTTGATCAGCATTTTTACGATATTGAAATTGCTCATGATCATGATGGCAAACGATGGTCATCACAGCCACATTCCTCCGTTGCACATTTACAAGAATCAAAGCCCTTGTACAGAGCATCTTCATATCCTGAAAAACAACAGGAGCTTCCTCGTTTTTCCAGTGAACCAATTTTGGTACCGAAGTCTTCATTTACTTCTTATCCTCCCCCTGGTGGTCTATCTCAGCTGGCTTCTCCAAGTCATAGTACAGGACACTTAAACATTCCTTATCATACTGGAGCAGCTCAGATGGCACTGTCATCTCAAAATCGTTCTCATTTCTCCAATTCTGCACTCCAGTCGAGTGCATTAAACCTCGGGTCACATTTTGGTGGAAACACACGCCAATTTCCTACCAGTTCCCCTCTTAATCAGCGAATACAGAATCAATTAGTCAACCAGGCAGGGTTGTATCCTGGAGATCATTCAAATCTCCTTAGTAATATGTTGCAGCAACAATTACACCTTCATAATGGATCTGTATCTCCTCACTTGATGACTCAATTACAACAACAGCAGCATAGACTGCATCATCCTGGTCAGCGATCTGCAGGCTACTTATCGGGCTTCCAGTCCCATTTATTCAATCCCCACCTTTCCTCTGGCTCATCCGTAATTAGCAAATATGAACATGTGCTTGGTCTTGCTGATGGTAGAGATCATAGACCAAAATCAACTCATAAAGGTAAACATAGCCTTCGTTTTTCCCAACATGGTTCTGATGCCAGTAGCCAGAAGAGTGACAGTGGTTCATTTCAGTTTCGGTCCAAGTATATGACAAGTGATGAAATTGAGAGCATTCTAAGAATGCAACTTGCTGTGACTCATAGTAATGACCCATATGTAGATGACTATTACCACCAAGCTTGTCTGGCAAAAAAACCTTCTGTGGCTAAGTTAAAACATCCATTTTGCCCAACCCAAATAAGGGAACTTCCTCCACGAACCCGTTCTAATGCTGAGCCACATGCATTTCTTCAGGTTGATGCCCTAGGGAGGGTTTCATTTTCATCTATTCGTCGACCTCGCCCTCTTCTTGATGTTGATCCTCCAAACACTTCTGTTAGCTCTGATCAAAAGATTTCTGAGAAGCCCCTTGAGCAGGAACCTAGGTTTGCTGCTAGAGTCACAATTGAGGATGGTCTTTGTCTTCTTCTTGATGTGGATGATATTGATCGTTACCTACAGTTTAATCAGCCACAAGATGGGGGAACACAATTAAGACGAAGAAGGCAGGTCCTGTTGGAAGGACTAGCAACTTCACTTCAACTTGTTGATCCACTGGGAAAGAATGGACACAAAGTCGGGCTTGCTGCGAAGGACGACCTTGTTTTCTTACGGTTGGCATCTCTTCCCAAGGGACGTAAGCTCCTTGCAAAATATCTTCAATTGCTTCTTCCTGGTAGCGAGTTTATGAGGATAGGCTGCATGACCGTCTTTCGTCATTTAAGATTCTTATTTGGTGGTCTCCCCTCAGATCCGGCAGCTTCAGAGACTACAAATAACCTTGCCAAGGTTGTTTGCCAATGTGTCCGAGGAATGGATCTTGGTGCTCTTAGTGCCTGCCTTGCAGCAGTAGTTTGTTCTGCAGAGCAGCCTCCTCTCCGTCCCATTGGAAGCACTTCCGGAGATGGTGCTTCCCTTATTTTAATATCCGTTCTTGAGAGGGCTGCTGAACTTTTAACTGATCCACATGCTGCTTGCAACTACAACATAGGTAATCGTCAATTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTCTCTCTAAGTATTGCATGAATAAATATCATAGTATCATGCAATCCATGCTTATACAAAGTACACCAAATGTGGATGACATCGGACCAGATGCTGCCAAAGCTATCAGTAGAGAAATGCCTGTTGAACTCTTGCGTGCTAGTCTCCCTCACACTGACAAGCGCCAGAGGAAGTTATTACTGGATTTCGCGCAGCGCTCCGTTCCTGTGGTTGGATTTAACAGCAACAGTGGAGGTAGTGGTGGTCATGTGAACTCAGAAACAGTGCTAAGTTGA 2664 0.4422 MVDMDGFGAGGGVDGAPNAENLRELGNVPSEGAVFDASQYAFFGKDVVQEVELGGLEDDVCLPTVESNEEEFFFNREEAEDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEWSQREDSLNWFDQNAYDSEGSTDGQRWSSQPHSSLAHLHDSKPLYRTSSYPEQQRQEQHYHLQHCSSEPVPNWLDQHFYDIEIAHDHDGKRWSSQPHSSVAHLQESKPLYRASSYPEKQQELPRFSSEPILVPKSSFTSYPPPGGLSQLASPSHSTGHLNIPYHTGAAQMALSSQNRSHFSNSALQSSALNLGSHFGGNTRQFPTSSPLNQRIQNQLVNQAGLYPGDHSNLLSNMLQQQLHLHNGSVSPHLMTQLQQQQHRLHHPGQRSAGYLSGFQSHLFNPHLSSGSSVISKYEHVLGLADGRDHRPKSTHKGKHSLRFSQHGSDASSQKSDSGSFQFRSKYMTSDEIESILRMQLAVTHSNDPYVDDYYHQACLAKKPSVAKLKHPFCPTQIRELPPRTRSNAEPHAFLQVDALGRVSFSSIRRPRPLLDVDPPNTSVSSDQKISEKPLEQEPRFAARVTIEDGLCLLLDVDDIDRYLQFNQPQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLASLPKGRKLLAKYLQLLLPGSEFMRIGCMTVFRHLRFLFGGLPSDPAASETTNNLAKVVCQCVRGMDLGALSACLAAVVCSAEQPPLRPIGSTSGDGASLILISVLERAAELLTDPHAACNYNIGNRQFWQASFDEFFGLLSKYCMNKYHSIMQSMLIQSTPNVDDIGPDAAKAISREMPVELLRASLPHTDKRQRKLLLDFAQRSVPVVGFNSNSGGSGGHVNSETVLS 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1400 887 MobiDBLite consensus disorder prediction 142 159 - -
Ssu8g1400 887 PANTHER PROTEIN PAT1 HOMOLOG 18 193 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 426 462 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 107 128 - -
Ssu8g1400 887 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 18 193 IPR039900 GO:0000290
Ssu8g1400 887 MobiDBLite consensus disorder prediction 263 284 - -
Ssu8g1400 887 PANTHER PROTEIN PAT1 HOMOLOG 192 866 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 142 163 - -
Ssu8g1400 887 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 192 866 IPR039900 GO:0000290
Ssu8g1400 887 MobiDBLite consensus disorder prediction 114 128 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 551 575 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 256 284 - -
Ssu8g1400 887 MobiDBLite consensus disorder prediction 445 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1400 Ssu-Chr8 26808868 26817846 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1400 K12617 - gmx:100787648 1582.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1400 8 26808868 26817846 Ssu8g1400 8 26808868 26817846 ECH