Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g1372 | ATGATGGCATTGGGGTGCAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTATTGTTTTGCCTTGGCATTGTCCTTGTGAATTCGGTTAATGAAGAGGGCTTGAGTCTTTTGAGGTTCAAAGCTTCCCTTGACCCAAACAACAACCTTTATAACTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTATTGCACAGGTTCAGTGGTAACTTCTGTGAAACTTTACCAACTTAATCTGTCAGGTACTTTGGTTCCTACCATCTGTAATCTTCCAAAGCTGCTTGAGTtgaatttgtcaaaaaatttcatctcTGGCCCCATTCCTGATGGTTTTGTTGACTGTGGTGGTTTGGAGATTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGACCCCTATTTGGAAAATCACTACCCTTAAAAAGCTTTACCTGTGTGAAAACTACATGCATGGTGAAGTGCCAGTGGAGCTTGGGAATTTGATATCACTTGAGGAGCTGGTCATTTATAGCAATAATTTAACTGGAAGAATTCCCTCATCAATAAGAAAGTTGAAGCAGCTTAGAGTTATAAGGGCAGGTCTGAATGTCCTCTCGGGGCCAATACCTGCTGAAATTAGTGagtgtgaaagcttggagataTTGGGGTTGGCACAGAATCAGCTAGAAGGTTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTCACCACTATACTTCTTTGGCAAAACTCATTATCTGGGGAGATTCCTCCTGAGATTGGCAGCATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTAAGTGGTTCTGTCCCCAGGGAACTGGGAAAGCTTTCCCAGTTGAAGAGGTTGTACATGTACACCAACCAGTTGAATGGAACACTTCCACCAGAGCTAGGGAACTGCACAAATGCTATTGAGATAGACCTTTCTGAAAACCGTTTGATTGGGAAAATTCCCAAGGAGTTGGGCCTGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAAAACAATCTGGAGGGTCATATTCCAAGGGAGCTTGGTCAGTTGAGCCTGCTAAGAAATTTAGACCTGTCACTTAATAACTTGACAGGTACAATTCCAATGGACTTTCAAAACCTTACATACATGGAGGATTTGCAGCTGTTTGACAATCAACTTGAGGGTGTGATCCCCCCTCATCTTGGAGCTGTTAGAAACCTTACTATTCTTGACATATCTGCAAACAACCTTGTTGGTATGATACCTGTCCATTTTTGTGAATATCAGAAGCTGCAATTCCTGAGCCTTGGGTCAAATAGGTTGTTTGGAAATATTCCTGATAGCCTCAAAACATGCAAATCTCTTGTGCAGCTTATGCTGGGGGACAACCTGTTGACAGGAAGCCTACCTGTGGAATTGTATGAACTTCACAATCTCACTGCACTTGAACTCTATCAGAACAGGTTTTCGGGGATAATAAACCCGGGGATAGGCCAACTCAGGAATCTAGAGAGGCTTCTCTTGTCAGATAACTACTTTGAAGGCTATCTCCCTCCCGAGATTGGAAATTTGGCGCAACTTGTCACATTCAATATTTCCTCGAACCGTTTTAGTGGAAGCATTCCTCATGAGTTGGGAAAATGTGTTAAACTGCAGAGGCTTGATCTTAGCAGGAACAACTTCACTGGCATGCTTCCAAATGAAATTGGCAACCTGGTGAACTTGGAGCTGTTGAAAGTCTCTGATAACATGCTCTCAGGAGAAATTCCAGGCACTCTGGGGAACCTTATTCGCCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCTTTTTACTTGGGAAGACTTGCAGCTCTTCAGATTGCTCTTAACCTGAGCCACAACAAACTTTCTGGCTCAATTCCTGGTAGCCTTGGGAACTTGCAAATGCTGGAGTCCCTTTATCTAAATGACAATCAACTTGTTGGTGAGATTCCTGCATCAATTGGTGACCTTCTCAGTCTTGTAGTATGCAATGTGTCTAACAACAAGCTGGTAGGGACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAACGGCTTGTGCCGTGTAGGTACTAGTCATTGTCATCCATCTGTATCTCCCTCTCATGCTGCAAAAAGCTGGATCAGAGATGGTTCATCAAGGGAAAAGATAGTGAGCATTGTTTCTGGGGTGGTTGGACtagtttctcttattttcatagTGTGTATATGTTTGGCCATGAGGCGCCGCAGCCCTGCTGCTTTTGTTTCACTTGAAGGGCAAACAAAGACTCATGTCTTGGATAACTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACTGGCAATTTTTCAGAAGCTGCAGTTCTAGGAAGAGGTGCTTGTGGCACTGTTTACAAGGCTGTTATGAGTGATGGTGAAGTGATTGCTGTTAAGAAGCTGAATTCGCGTGGAGAAGGAGCAAATAATGTTGACAGAAGCTTCCTTGCTGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTATATGAATACATGGAAAATGGAAGCCTTGGGGAACAACTTCATTCAAGTGCAACCACTTGTGCATTGGATTGGGGTAGTCGATATAAAATAGCTCTTGGAGCGGCAGAAGGCTTATGCTATCTTCACTATGATTGCAAACCTCAAATCATCCATCGTGATATAAAGTCAAACAACATACTACTCGATGAGGTGTTTCAGGCTCACGTTGGAGACTTTGGCTTGGCAAAGTTGATTGATTTTTCCTACTCAAAATCCATGTCTGCTGTGGCTGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGATTTAGTGACTCGTGTGAGAAGAGCAATTCAAGCATCAGTGCCAACATCTGAATTATTTGACAAGAGATTGAATCTTAGTGCACAGAAGACAGTTGAAGAAATGTCTCTTATTCTCAAAATTGCCTTGTTCTGCACCAGCACATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTGACTGATGCTAGGGAATATGTGAGCAACTCACCAACCTCTCCTACATCAGAATCTCCATTGGATGAGGGTGACGGCACTTCTTCCAAAGATGGTGGTCATGAGTTGTAA | 3342 | 0.4249 | MMALGCSFHFLNGVYMVLLFCLGIVLVNSVNEEGLSLLRFKASLDPNNNLYNWNSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGTLVPTICNLPKLLELNLSKNFISGPIPDGFVDCGGLEILDLCTNRLHGPLLTPIWKITTLKKLYLCENYMHGEVPVELGNLISLEELVIYSNNLTGRIPSSIRKLKQLRVIRAGLNVLSGPIPAEISECESLEILGLAQNQLEGSIPRELQKLQNLTTILLWQNSLSGEIPPEIGSISSLELLALHQNSLSGSVPRELGKLSQLKRLYMYTNQLNGTLPPELGNCTNAIEIDLSENRLIGKIPKELGLISNLSLLHLFENNLEGHIPRELGQLSLLRNLDLSLNNLTGTIPMDFQNLTYMEDLQLFDNQLEGVIPPHLGAVRNLTILDISANNLVGMIPVHFCEYQKLQFLSLGSNRLFGNIPDSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELYQNRFSGIINPGIGQLRNLERLLLSDNYFEGYLPPEIGNLAQLVTFNISSNRFSGSIPHELGKCVKLQRLDLSRNNFTGMLPNEIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISFYLGRLAALQIALNLSHNKLSGSIPGSLGNLQMLESLYLNDNQLVGEIPASIGDLLSLVVCNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTSHCHPSVSPSHAAKSWIRDGSSREKIVSIVSGVVGLVSLIFIVCICLAMRRRSPAAFVSLEGQTKTHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAVMSDGEVIAVKKLNSRGEGANNVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWGSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTRVRRAIQASVPTSELFDKRLNLSAQKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLTDAREYVSNSPTSPTSESPLDEGDGTSSKDGGHEL | 1113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g1372 | 1113 | Gene3D | Phosphorylase Kinase; domain 1 | 769 | 882 | - | - | |
Ssu8g1372 | 1113 | Gene3D | Ribonuclease Inhibitor | 591 | 717 | IPR032675 | - | |
Ssu8g1372 | 1113 | Pfam | Leucine rich repeat N-terminal domain | 31 | 68 | IPR013210 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 286 | 310 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 238 | 262 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 647 | 671 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 622 | 646 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 550 | 573 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 166 | 190 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 502 | 526 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 334 | 358 | IPR003591 | - | |
Ssu8g1372 | 1113 | SMART | LRR_typ_2 | 574 | 598 | IPR003591 | - | |
Ssu8g1372 | 1113 | Gene3D | Ribonuclease Inhibitor | 477 | 590 | IPR032675 | - | |
Ssu8g1372 | 1113 | Gene3D | Transferase(Phosphotransferase) domain 1 | 883 | 1095 | - | - | |
Ssu8g1372 | 1113 | ProSiteProfiles | Protein kinase domain profile. | 804 | 1085 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g1372 | 1113 | SUPERFAMILY | L domain-like | 44 | 394 | - | - | |
Ssu8g1372 | 1113 | SMART | serkin_6 | 804 | 1085 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g1372 | 1113 | Gene3D | Ribonuclease Inhibitor | 25 | 82 | IPR032675 | - | |
Ssu8g1372 | 1113 | Gene3D | Ribonuclease Inhibitor | 83 | 400 | IPR032675 | - | |
Ssu8g1372 | 1113 | PANTHER | OS07G0152200 PROTEIN | 17 | 1089 | - | - | |
Ssu8g1372 | 1113 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 928 | 940 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g1372 | 1113 | Gene3D | Ribonuclease Inhibitor | 406 | 476 | IPR032675 | - | |
Ssu8g1372 | 1113 | SUPERFAMILY | Protein kinase-like (PK-like) | 781 | 1078 | IPR011009 | - | |
Ssu8g1372 | 1113 | MobiDBLite | consensus disorder prediction | 1084 | 1113 | - | - | |
Ssu8g1372 | 1113 | Pfam | Protein kinase domain | 806 | 1075 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g1372 | 1113 | Pfam | Leucine Rich Repeat | 552 | 574 | IPR001611 | GO:0005515 | |
Ssu8g1372 | 1113 | SUPERFAMILY | RNI-like | 363 | 686 | - | - | |
Ssu8g1372 | 1113 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 17 | 1089 | - | - | |
Ssu8g1372 | 1113 | MobiDBLite | consensus disorder prediction | 1084 | 1100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g1372 | Ssu-Chr8 | 26232722 | 26237157 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g1372 | 24 | 1083 | Receptor kinase-like Gene Family | AT1G73080 | 37.432 | 0.0 | 624 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Ssu8g1372 | Pkinase | 6.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g1372 | - | - | gmx:100818311 | 2014.96 |