Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1371 ATGGATGAAGTAGTTCTTGTGGGGTTCTGGACCAGCCCTTATGTGATGAGAGTGAAGATTGCCTTGTTGGAGAAGGGAGTTCAGTTCATctacaaggaagaaaaagatatatttgaGAATCAAAACAAGAGTGAGTTGCTCCTGAAGTCCAATCCCATTCACAAGAAGGTTCCAGTCCTCATCCACAATGGTAGACCCATCTGCGAGTCCCTCATCATCCTTGAGTACATTGATGAGGTTTGGAAGCAAGAAAAACAGTTGTTTTCTGATGATCCTTACTACCGAGCCAGAGCCAGGTTTTGGATTGATTTATTTGACAAGAAGATAGCTGATTGTGGCAGGAGGATGTGGGCCAGCAAAGGAGCAGACCAAGAGGCTGCAAAGAAAGAGTTTGTGGAGTTATTGAAACTCTTGGAAAATGAACTAGAAGACAAGCCTTATTTTGCTGGTGATTATTTCGGCCTTTTGGATGTAGCCTTGTTACCAATCACGTGCAGGTTTTATGCATACGAGACATTTTGCAAATTTAGTGTGGAGAAAGAATGCCCAAGGTTCATGGAATGGGTCAAAAGGTGTAATCAGAGGGAGAGTGTTTCCAAGACACTTCCTGACCCATATAAAGTCTATGACTTCGTGTTGGAGGTTAAACGAAGCATATTTGGGAAGAGGATTAGAATTGCACTGGCTGAAAAGGGTGTTACCTATGCGTTCAAGGAAGAGAATATAAGGAACAAGAGTCCTTTGCTTTTGCAAATGAACCCAGTTCACAAGAAGATCCCAGTTCTCATCCACAATGGCAAACCCATTTGTGAATCTGCAATTATTGTGCAGTACATAGATGAGGTCTGGAGCCACAAAGCTCCACTCTTGCCCTCTGATCCTTACCAGAGAGCTCAAGCCAGGTTTTGGGTGTATGAAAGTTGGAGGAAAATGTGGCTTTCTAAAGGTGAAGAGCATGAGACAGGGAAGATGGAGTTGATCTCTAACTTTAAGTTACTAGAAGAGACATTGGGTGACAAATCTTTTTACGGGGGAGACACATTTGGGtatgttgatattggtttgatCCCCTTCTGTAGCTGGTTTTATACTTATGAGATGTTGGGCAATTTCAAAATGGAAGTGGAGTGTCCTAAACTTGTGGCTTGGGCTAAGAGATGCCTGCAAAGAGAAACTGTATCCAAATCACTTCCTGATGAGAAGGTGGTGTATGATCGTGTTGTGGCCTACCAACAAGCACTTGGATTGTAA 1251 0.4173 MDEVVLVGFWTSPYVMRVKIALLEKGVQFIYKEEKDIFENQNKSELLLKSNPIHKKVPVLIHNGRPICESLIILEYIDEVWKQEKQLFSDDPYYRARARFWIDLFDKKIADCGRRMWASKGADQEAAKKEFVELLKLLENELEDKPYFAGDYFGLLDVALLPITCRFYAYETFCKFSVEKECPRFMEWVKRCNQRESVSKTLPDPYKVYDFVLEVKRSIFGKRIRIALAEKGVTYAFKEENIRNKSPLLLQMNPVHKKIPVLIHNGKPICESAIIVQYIDEVWSHKAPLLPSDPYQRAQARFWVYESWRKMWLSKGEEHETGKMELISNFKLLEETLGDKSFYGGDTFGYVDIGLIPFCSWFYTYEMLGNFKMEVECPKLVAWAKRCLQRETVSKSLPDEKVVYDRVVAYQQALGL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1371 416 CDD GST_C_Tau 294 414 IPR045074 GO:0004364|GO:0006749
Ssu8g1371 416 Gene3D - 293 416 - -
Ssu8g1371 416 Gene3D - 91 214 - -
Ssu8g1371 416 CDD GST_C_Tau 92 214 IPR045074 GO:0004364|GO:0006749
Ssu8g1371 416 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 215 - -
Ssu8g1371 416 SUPERFAMILY Thioredoxin-like 4 108 IPR036249 -
Ssu8g1371 416 SUPERFAMILY Thioredoxin-like 216 305 IPR036249 -
Ssu8g1371 416 CDD GST_N_Tau 4 81 - -
Ssu8g1371 416 CDD GST_N_Tau 218 283 - -
Ssu8g1371 416 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 293 411 IPR010987 -
Ssu8g1371 416 SUPERFAMILY GST C-terminal domain-like 281 412 IPR036282 -
Ssu8g1371 416 SFLD Main.3: Omega- and Tau-like 212 413 IPR045073 -
Ssu8g1371 416 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Ssu8g1371 416 Pfam Glutathione S-transferase, N-terminal domain 218 281 IPR004045 -
Ssu8g1371 416 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Ssu8g1371 416 Gene3D Glutaredoxin 215 292 - -
Ssu8g1371 416 Gene3D Glutaredoxin 1 89 - -
Ssu8g1371 416 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 212 410 - -
Ssu8g1371 416 SUPERFAMILY GST C-terminal domain-like 79 215 IPR036282 -
Ssu8g1371 416 SFLD Glutathione Transferase (cytosolic) 212 413 IPR040079 -
Ssu8g1371 416 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Ssu8g1371 416 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 211 IPR010987 -
Ssu8g1371 416 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 85 IPR004045 -
Ssu8g1371 416 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 212 410 IPR045073 -
Ssu8g1371 416 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 215 IPR045073 -
Ssu8g1371 416 Pfam Glutathione S-transferase, C-terminal domain 326 386 - -
Ssu8g1371 416 Pfam Glutathione S-transferase, C-terminal domain 125 191 - -
Ssu8g1371 416 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 208 287 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1371 Ssu-Chr8 26212781 26228454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1371 218 416 Glutathione S-transferase Gene Family AT1G17180 59.709 1.84e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1371 K00799 - gmx:547950 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1371 8 26212781 26228454 Ssu8g1371 8 26212781 26228454 ECH