Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1359 ATGGCAGAAGAGGTGGTTTTGCTAGATTTCTGGCGAAGTCCATTTGGGATGAGGGTTAGGATTGCTCTTGCTGAAAAGGGTATCAAGTATGAGTACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTCATCCACAAAGGCAAGCCCATATGTGAATCTCTCATTGTTGTTCAGTACATTGAGGAGGTTTGGAATGACAGAAATCCCTTGTTGCCTTCCGACCCTTATAAGAGAGCTCAGGCTAGATTCTGGGCTGACTATGTTGACAAAAAGATATATGATCTTGGAAGCAAGTTTAGGACATcaagaggagaagaaaaaaaagctgCCAAGAAGGAGCTCATAGAGGCCCTTAAATTGTTGGAGGAACAGCTGGGAGACAAGACTTATTTTGGAGGAAACAATCTTGGTTTTGTGGATATAGCACTTGTTCCATTCTACGCTTGGTTCAAAGCCAATGATGCCTTTGGCCCCCTCAACATAGAGCGTAAGTGCCCCAAGTTTGTTGCTTGGGCCAAGAGGTGCATGCAGAAAGAGAGCGTTTCCAAGTCTCTTCCTGATCAGAATAAGGTCTACGAGTTCATTGTGGAAAGGAGAAAGAAGTTAGGCATTGAGTAG 660 0.4303 MAEEVVLLDFWRSPFGMRVRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHKGKPICESLIVVQYIEEVWNDRNPLLPSDPYKRAQARFWADYVDKKIYDLGSKFRTSRGEEKKAAKKELIEALKLLEEQLGDKTYFGGNNLGFVDIALVPFYAWFKANDAFGPLNIERKCPKFVAWAKRCMQKESVSKSLPDQNKVYEFIVERRKKLGIE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1359 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Ssu8g1359 219 SFLD Main (cytGST) 2 217 - -
Ssu8g1359 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Ssu8g1359 219 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Ssu8g1359 219 Coils Coil 118 138 - -
Ssu8g1359 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Ssu8g1359 219 CDD GST_N_Tau 5 78 - -
Ssu8g1359 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Ssu8g1359 219 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
Ssu8g1359 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Ssu8g1359 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Ssu8g1359 219 Gene3D Glutaredoxin 1 87 - -
Ssu8g1359 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Ssu8g1359 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Ssu8g1359 219 Gene3D - 88 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1359 Ssu-Chr8 25881035 26004244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1359 1 219 Glutathione S-transferase Gene Family AT1G17180 63.014 7.07e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1359 K00799 - gmx:547520 384.03