Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1357 ATGACTTCTTTCCAAAGCATCAACATTGAGACCCAAATTCCAGCAGAGCTCCTCATAGCTCAGATCATGCAACTTCATGCAAGCATCTCCAAGCTTGAATCCCTCAGGCCTTGTAAGCAAGTCAATAGCCTTTTCACTCACCTAGTGAAACTTTGCACCCTCCCTTCATCCATTGACATTGAGGCCTTGCCCCAAGAGGTGCAACACATGCGTGAGAGCCTCATTAACCTTTGTGGCCATGCTGAAGGGCTCTTAGAGCTTGAATTCTCAACCTTCATAAGCCTCACACCCGAGCCACTGAATAATGCAACCCTCTTCCCTTACTATGGGAACTATGTCAAACTAGCAAACCTGGAGAACAAAATCATCAAGGAAAATGGGGTGGTGAATGCAAAGAAAGTGGCCTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCACCACATGGAGTCCACACACTTTGACAACTTTGACATTGATGAGAAGGCAAATGAGGTAGCTCGAAAGATTATTGCTTCTGATGCGGCACTTGAGAAGAGGATGAAGTTTGAGACACGAGACATCATGGAAGTGAGAGAGAGGTTGGGGGAATATGATTGCATCTTTTTGGCAGCACTTGTGGGTATGAGTAGGGAAGCAAAAGTGAAGATTCTGGGGCACATAAGGAAGTACATGAAGGAGGGAGGGATCTTGCTTGTGAGAAGTGCTAAGGGGGCAAGAGCTTTTTTGTACCCTATTCTTGAGGAACGTGACATGGTGAATTTTGAAGTGCTTACCATCTTTCACCCCACAAATGATGTGATCAACTCGGTTGTTCTTCTTCGCAAGCCTAAAGCTTAA 855 0.4561 MTSFQSINIETQIPAELLIAQIMQLHASISKLESLRPCKQVNSLFTHLVKLCTLPSSIDIEALPQEVQHMRESLINLCGHAEGLLELEFSTFISLTPEPLNNATLFPYYGNYVKLANLENKIIKENGVVNAKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEVARKIIASDAALEKRMKFETRDIMEVRERLGEYDCIFLAALVGMSREAKVKILGHIRKYMKEGGILLVRSAKGARAFLYPILEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1357 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 240 IPR029063 -
Ssu8g1357 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Ssu8g1357 284 CDD AdoMet_MTases 162 238 - -
Ssu8g1357 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Ssu8g1357 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Ssu8g1357 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Ssu8g1357 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1357 Ssu-Chr8 25833190 25834044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1357 17 281 Nicotianamine Synthase Gene Family AT5G56080 49.442 3.50e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1357 K05953 - gmx:100819726 509.605