Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1354 ATGGCTATGGCAAATAGTAGCATCAACTTGGTGCTTCAGCAGGGGTCAATGTTGCCCCATGAACTTCCTGTAGCTTCTCAACTGAGACCGTCAAGCTTTCATTCGTTTTCTTCAACTTGGGCTATTACCAATGGAGCCCTCCATGTCTCACCACAAAGGAGGAACTGCAGTGcttcttgttgttattgctTCCGTTTCAGGGAATGCAGATGCAAGTTGAAACGGCTTGTCAGAAGCTGCTCCACCAGTGAGTTTGTTATTGCCAGTGATGAAAACTATGGCAACAAGCAGGTTGTTCGTCTCACTCCCCGCCTTTATGATTATGTCCTAAAAAATGTTCAAGAACCAGAGATTCTAAGGCAATTGCGAGGGGAGACAGCCTCTATGCGTGGAAGTCAGATGCAGGTGTCCCCTGATCAGGCACAGCTGCTTGTAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATCGAAGTTGGTGTTTATACTGGATACTCATCACTAGCCATAGCATTAGTTCTGCCAGAATCAGGTCGTTTAGTTGCCTGTGAACGAGATGCCAAATGTCTTGATGTTGCCAAAAAGTATTATCAGCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCATTGGATTCTCTAGAATCTTTAATTCTGAATGGTGAAGCAGGAAGCTATGATTTTGCGTTTATTGATGCCGAGAAAAGAATGAACGAGAAATATTTTGAACTGCTACTACAGCTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCACGGAAAAGTTGCTGACCCACTGGTATATGACCCTAAAACTATCAGCATTAggaattttaatcaaaatttaatggaAGACAAGCGTGTAAGCATCAGTATGGTACCTATAGGAGATGGGATGACAATCTGTCGAAAAAGATGA 939 0.4185 MAMANSSINLVLQQGSMLPHELPVASQLRPSSFHSFSSTWAITNGALHVSPQRRNCSASCCYCFRFRECRCKLKRLVRSCSTSEFVIASDENYGNKQVVRLTPRLYDYVLKNVQEPEILRQLRGETASMRGSQMQVSPDQAQLLVMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKCLDVAKKYYQLAGVSHKVDVKLGLALDSLESLILNGEAGSYDFAFIDAEKRMNEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVYDPKTISIRNFNQNLMEDKRVSISMVPIGDGMTICRKR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1354 312 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 95 312 IPR002935 GO:0008171
Ssu8g1354 312 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 83 312 - -
Ssu8g1354 312 CDD AdoMet_MTases 155 260 - -
Ssu8g1354 312 Pfam O-methyltransferase 113 311 IPR002935 GO:0008171
Ssu8g1354 312 PANTHER O-METHYLTRANSFERASE-RELATED 83 312 - -
Ssu8g1354 312 Gene3D Vaccinia Virus protein VP39 87 312 IPR029063 -
Ssu8g1354 312 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 312 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1354 Ssu-Chr8 25779588 25782211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1354 74 300 Monolignol Biosynthesis Gene Families AT3G62000 74.783 1.18e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1354 - - gmx:100776619 552.747