Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1324 ATGACCGAAGAAGACAAGCCGAGAGCCTTCTCCGGCGACCATCACCACCCTACGGCGCCGCCGCCGCCGCAACCCTTTCCGGCTGCCCAGTACGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCGGAGCCGCAGCCCGCCATCGGCTTTCCTCATCCCGTTCCGCCGCCCGGCGTCACCGACTCCTCCGCCCCTCCTCCGCCGTATTACGGTGGGTACCAAGCAGTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTAAGAGAATGCCGCCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATATTAGGCTTCTTTCTTGTTGGTATTCCGTGGTACGTTGGGGCAATAATTATGCTTTGTTCCAGAGTAGACTATCGGGAGAGACCGGGATATATTGCTTGTATAGTTGCTGCTGTTCTGGCTACAATTGCGATTGTTCTTGGTGGGACAAAGGCAGCAGATGACTGGTAA 489 0.5706 MTEEDKPRAFSGDHHHPTAPPPPQPFPAAQYGTFQGVANYPPPPEPQPAIGFPHPVPPPGVTDSSAPPPPYYGGYQAVPGYAVAEGRPVRECRLGCCGLGCGWCLFILGFFLVGIPWYVGAIIMLCSRVDYRERPGYIACIVAAVLATIAIVLGGTKAADDW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1324 162 MobiDBLite consensus disorder prediction 1 68 - -
Ssu8g1324 162 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 162 IPR044804 -
Ssu8g1324 162 MobiDBLite consensus disorder prediction 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1324 Ssu-Chr8 24691131 24694219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1324 3 162 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.173 1.78e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1324 - - gmx:100810998 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1324 8 24691131 24694219 Ssu8g1324 8 24691131 24694219 ECH