Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1321 ATGGAAGCAGCATGGGCCACAATTCTGACACTGATACTGATACTCGTTCTGATATGGGCATGGAAGGTGCTGAACTTGTTATGGCTGAGGCCGAAGAGACTAGAAAGGCTGCTAAGAGAGCAAGGCCTTCAAGGCAATCCATACAAGCTTTTCATTGGGGACATGAAGGAATTTGACAAGATGCGAATGGAAGCCTTGTCCAAACCCATGAATCTCTCTCATGACATAGTGCCGCGTGTGTTTCCCTATGTCCAACAGAGTGTCAACAAACATGgcaaaaattcttttatctgGTTTGGACCAATACCAAGGGTGACCATCACAGATTCCGAGCTAATCAAAGATGTACTCAACAAGATTTATGACTTCGGAAAGCCTATCATGAATCCGCAAGTAAGGTTGCTAGTTTCTGGTCTTGCAAGCTATAACGGAGAAAACTGGAGCAAGCACAGAAAGATAATCAACCCCGCATTCAATTTAGAAAAGTTGAAGCTTCTTGGGCCTGACTTGGTGCTTTCCTCAGGACTTCTCCAAGATGCATTTGTGCTGTCATGA 555 0.4342 MEAAWATILTLILILVLIWAWKVLNLLWLRPKRLERLLREQGLQGNPYKLFIGDMKEFDKMRMEALSKPMNLSHDIVPRVFPYVQQSVNKHGKNSFIWFGPIPRVTITDSELIKDVLNKIYDFGKPIMNPQVRLLVSGLASYNGENWSKHRKIINPAFNLEKLKLLGPDLVLSSGLLQDAFVLS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1321 184 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 172 - -
Ssu8g1321 184 Pfam Cytochrome P450 83 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1321 184 Gene3D Cytochrome P450 28 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1321 184 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 6 172 - -
Ssu8g1321 184 SUPERFAMILY Cytochrome P450 72 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1321 Ssu-Chr8 24538060 24542898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1321 19 174 Cytochrome P450 AT3G14620 51.282 8.90e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1321 - - gmx:100808323 241.891