Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1307 ATGCTCGCCAGTTACGGCGTCTTCCACGAGCACCTCGCCGCCGGCGAACGGAAGTACTCCCTCACCGACGTTGGCAGAATGCTCGTCACCGATGACCAAGGCCTGTCCTACGCGGCTTACGTGCTCCAACACCACCAGGATGCGTTGATGCGAGCGTGGTCGTTGGTGCATGAGGCAGTAGGGGACCCTAAGAGGGAGCCCTTCGAGAGGGCCAATGGAGAGTCAGCGTATAGGTACTACCTGAAGCAACCAGAGATGAACGAACTAATGGTGAAGGCCATGTCAGGGTGTCAGTGCCCTTCATGA 306 0.5817 MLASYGVFHEHLAAGERKYSLTDVGRMLVTDDQGLSYAAYVLQHHQDALMRAWSLVHEAVGDPKREPFERANGESAYRYYLKQPEMNELMVKAMSGCQCPS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1307 101 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 101 IPR016461 GO:0008168
Ssu8g1307 101 PANTHER O-METHYLTRANSFERASE 1 100 IPR016461 GO:0008168
Ssu8g1307 101 Gene3D - 1 35 IPR036388 -
Ssu8g1307 101 Gene3D Vaccinia Virus protein VP39 36 99 IPR029063 -
Ssu8g1307 101 PANTHER OS02G0823400 PROTEIN 1 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1307 1 100 Monolignol Biosynthesis Gene Families AT3G53140 69.307 3.32e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1307 - - gmx:100784957 171.014