Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1306 ATGTCGCTGCAATTAGGCCAAACTCCAACTCTTGTGGTTTCATCAGTTGATGTGGCCAATGAAATATACAAAACCCATGATGTCACTTTTGCCAACAAGCCTCAGACTACAGCCATGAAAATCATCATGTATGGGTGCATGGGCATGGCTTTGCACCTTACGACAAAGAGTGGAGACAGAAAAGGAAGATATGTGTTCTTGAGCTTCTAA 210 0.4286 MSLQLGQTPTLVVSSVDVANEIYKTHDVTFANKPQTTAMKIIMYGCMGMALHLTTKSGDRKGRYVFLSF 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1306 69 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 53 - -
Ssu8g1306 69 SUPERFAMILY Cytochrome P450 2 52 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1306 69 Gene3D Cytochrome P450 1 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1306 69 PANTHER CYTOCHROME P450 71B11-RELATED 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1306 Ssu-Chr8 24131825 24132034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1306 1 45 Cytochrome P450 AT4G20240 53.333 3.27e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1306 - K20617 aip:110269870 77.0257