Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1302 ATGCAGCAAGATCAGCTCAAGAAGGTTGTTTCTTTCTCCATGATTGATTGCCCCTTTGTGTGCAGAGTTTGTTACGGTGCTGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATCATGTTGCCGCCTTCAAAGAGGGagtttaaagatatttatgtagTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGACGATTTGACCCGTGAACACCATCAGTTTTTTCTTTATCAGATGCTACGTGCATTGAAGTATATGCATACAGCTAGTGTATATCACAGAGACCTTAAACCCAAGAATATACTGGCAAATGCGAACTGCAAACTCAAAGTTTGTGATTTTGGATTGGCAAGAGTTGCATTCAATGATACCCCAACAACAACTTTTTGGACGGGAGGACTTGATCTCTCCTGGAAGTTGATTTTATCTGTCCTTCAGCAATTGATATATGGAGCATTGGATGCATTTTGCAGAGGTGTTGACAGGAAAGCCACTGTTTCCTGTGCAATAGATCAATTCAGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGCCCCGTGATTCCTCCGGAAAGGAAGCATGTCTCCCTTCCAAGgtCCACTGTTCACTCTAGTACAGTTCCTCCTAGTACACAGCCATCTTTTACTTCATACGAGAACAAGCAAATGGTGGAAGAGGCATCAAAGATTTCGAGATCAGTAGAATCAAATTCCGGAAGTCAATTAAGGAGTTCGCGACCTCCACCAAGAGTGCCAGCAGGAAACTCGGGTGACTCTAGGAATGGCTTTGCTTTGAAGCCAATTTTTGAGCACACTGCAGCTGAGGTACCCATGGTGCCACTTTTGAGCACTATCATCCAGAACTCCCTATAG 918 0.4216 MQQDQLKKVVSFSMIDCPFVCRVCYGAEVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTASVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTPTTTFWTGGLDLSWKLILSVLQQLIYGALDAFCRGVDRKATVSCAIDQFRKQFAYLEENHGKSGPVIPPERKHVSLPRSTVHSSTVPPSTQPSFTSYENKQMVEEASKISRSVESNSGSQLRSSRPPPRVPAGNSGDSRNGFALKPIFEHTAAEVPMVPLLSTIIQNSL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1302 305 Gene3D Phosphorylase Kinase; domain 1 28 66 - -
Ssu8g1302 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 28 150 - -
Ssu8g1302 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 186 266 - -
Ssu8g1302 305 Pfam Protein kinase domain 27 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1302 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 28 150 - -
Ssu8g1302 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 186 266 - -
Ssu8g1302 305 SMART serkin_6 4 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1302 305 MobiDBLite consensus disorder prediction 196 278 - -
Ssu8g1302 305 Gene3D Transferase(Phosphotransferase) domain 1 67 136 - -
Ssu8g1302 305 SUPERFAMILY Protein kinase-like (PK-like) 22 140 IPR011009 -
Ssu8g1302 305 MobiDBLite consensus disorder prediction 214 260 - -
Ssu8g1302 305 ProSiteProfiles Protein kinase domain profile. 1 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1302 Ssu-Chr8 23963412 23968498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1302 181 219 MAP Kinase Gene Family AT3G14720 71.429 4.49e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ssu8g1302 Pkinase 5.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1302 - K04371 fve:101294541 238.424