Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1284 ATGGATTGTGTAATAAGTAGTATACTTGTCCTCTTATTGACATGCACTACTATACACGTTCtctcaaataaaataaggagAAAACGAAACTACAAGCTTCCACCAGGACCTTCTCCTCTTAACCTTGTGGGAAACATTGTTGAACTTGGCAAAAAGCCACAACAAACTTTGGCCAAGCTTGCTAAAATTCATGGCCCCATAATGCGTTTGAAGCTAGGCCAACTAACCACCATAGTCATCTCATCACCAGACATAGCCAAAGAGGTGTTCCAAACCCATGATTTGTTATTCTCAAACCGAACAATTCCACATGCCACGACAGTTCACAACCACAATCATAATAGCGTGGCCTTCCTCCCCATTTCACCTCTTTGGCGAGACCTTAGGAAAATATGCAATAGCCAATTGTTCTCCCACAAGTCCCTTGATGCAAGCCAAAACCTTAGACACAAGAAACTCGAAGAACTCCTTCGTGATGTGCATAGAAGCAGCCTCAGTGGTGAAGCGGTGGATATTGGAACTGCGGCTTTTAGgacttcaattaattttttgtcaaacatttttttctctttggaTTTTGTTACCTCTGTAGGTGAAACTGAAGAGTACAAGGGTATAGTTGAGAATCTTGCGAGAGCAATTGCAACGCCAAACGTGGAGGATTTTTTCCCGTTGGTTAAGATGGTTGATCCACAAGGCATTAGAAGGCGATCATCTGCTTACGTTTCCAAGTTGTTCGTTATTTTTGACCGCTTGATTGACAAACGAATGGAGTTCGGAGATGCCACAAATAATGACATGCTAGACACCTTGCTCAACATTTCTCAAGAGGATGGCCAAAAGATGGACCACAAAAAGATTAAGCATTTATTCCTTGATTTACTTGTTGCTGGAACTGATACTACTTCCTATACAACGGAATGGGCAATGACTGAGCTAATCAATAACCCGGATATAATGTCAAAAGCCAAAAGAGAGCTTGAGCAAACCATTGGAATTGGCAATCCTATTGAGGAATCAGACATTGCAAGACTCCCGTACTTGGGTGCAATAATAAAAGAGACCTTGCGTTTGCACCCAGGGGCCCCACTTTTGCTGCCTCGAAAAGCCAACATAAATGTGGAGATTCATGGCTACACTATCCCACAGGGTGCACAAATCGTGATTAATGAATGGGCGATTGGAAGGAACCCAAGCATATGGGATAatcctaatttattttcacCCGATAGATTTTTGGGGTCAGACATTGATGTCAAAGGTCGACATTCTCAACTCACACCGTTTGGCGGCGGGCGACGAATTTGTCCTGGCTTGCCACTAGCTATGAGGATGTTGCACTTGATGCTGGGGTCGTTAATCAACGCTTTTGAttggaaatttgaaaatgatgcGAACCCAGATATCGACATGCGTCAACCCTTGCGTGCTATTccatttagaataaataaaccTAATTAA 1461 0.4025 MDCVISSILVLLLTCTTIHVLSNKIRRKRNYKLPPGPSPLNLVGNIVELGKKPQQTLAKLAKIHGPIMRLKLGQLTTIVISSPDIAKEVFQTHDLLFSNRTIPHATTVHNHNHNSVAFLPISPLWRDLRKICNSQLFSHKSLDASQNLRHKKLEELLRDVHRSSLSGEAVDIGTAAFRTSINFLSNIFFSLDFVTSVGETEEYKGIVENLARAIATPNVEDFFPLVKMVDPQGIRRRSSAYVSKLFVIFDRLIDKRMEFGDATNNDMLDTLLNISQEDGQKMDHKKIKHLFLDLLVAGTDTTSYTTEWAMTELINNPDIMSKAKRELEQTIGIGNPIEESDIARLPYLGAIIKETLRLHPGAPLLLPRKANINVEIHGYTIPQGAQIVINEWAIGRNPSIWDNPNLFSPDRFLGSDIDVKGRHSQLTPFGGGRRICPGLPLAMRMLHLMLGSLINAFDWKFENDANPDIDMRQPLRAIPFRINKPN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1284 486 Pfam Cytochrome P450 34 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Ssu8g1284 486 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 483 - -
Ssu8g1284 486 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 483 - -
Ssu8g1284 486 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 Gene3D Cytochrome P450 19 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1284 486 SUPERFAMILY Cytochrome P450 34 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1284 Ssu-Chr8 23330993 23333145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1284 4 483 Cytochrome P450 AT2G45550 43.145 2.64e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1284 - - gmx:100792017 849.736