Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1283 ATGGATTCCGTAATAAGTATACTTCTCCTCTTACTGACATGCACTATTATACAcgttttctcaaataaaataaggagGAAACGAAACCACAAGCTTCCACCAGGACCTTCTCCTCTTGCCCTTGTGGGAAACCTCTATGAACTTGGCAAAAAGCCACAACAAACATTGGCCAAGCTTGCTGTCATACATGGCCCCATAATGCGTTTGAAGCTAGGTCAACTAACCACCATAGTTATCTCTTCACCAGACATAGCCAAAGAGGTGCTCCAAACCCATGATTTGTTATTCTCAAACCGAACAATTCCTCAAGCCACAACAGTtcacaaccacaaccattaTAGCTTACCCTTCCTCCCCATTTCACCTCTTTGGCGAGACCTTAGGAAAATATGCAATAACCAATTGTTCTCCCACGAGTCCCTTGATTCAAGCCAAAACCTTAGACGCCATAAACTGCATGAACTCCTCAATGATGTGCATACAAGCAGCCTCAGTGGTGAAGCAGTGGATATTGGAACTGTGGCTTTTAggactttaattaattttttgtcaaacacttttttctctttggaTTTTGTCAACTCTGTAGGTGATCAAACTGAAGAGTACAAGGGTATAGTGGAGAATCTTGTGAGGGCAATTGCAACGCCAAACTTGGTGGATTTTTTCCCGTTGTTGAAGCTGGTTGATCCACAAGGCATTAGAAAGCGCTCGTCTACTTACATTTCCAAGTTGTTCGTTATTTTTGACCACTTGATTGACAAACGGTTGGAGTTCGGAGGAGATGTCACAAATAATGACATGCTAGACACCTTGCTCAACATTTCTCAAGAGGATGGCCAAAAGATGGACAACAAAAAGATTAAGCATTTGTTCCTTGATCTAATTGTTGCGGGAACTGATTCAACTTCCTATGCAATAAAATGGGCCATGACTGAGCTAATCAATAACCCAGATGCAATGTCAAAAGCCAAAAGGGAGCTTGAGCAAACCATTGGAATAGGCAATCCTGTTGAGGAATCAGACATTACAAAACTCACATACTTGCATGCAATAGTAAAAGAGACCTTGCGCATGCACCCATCGGCCCCACTTTTGCTACCTCGAAAAGCCAAGATAGATGTGGAAATCAATGGCTACACTATTCCACAGGGTGCACAAATCCTAATTAATGAATGGGCTATTGGAAGGAACCCAAGCATATGGGACAATCCTAGTTTATTTTCACCCGAGAGATTCTTAGGGTCAGAAATTGATGTCAAAGGTCGACACTCTCAACTCACACCATTTGGCGGTGGGCGGCGGATATGTCCTGGCTTGCCACTAGCTATGAAGATGTTGCATTTGATGTTGGGATCATTAATCAACACTTTTGATTGGAAACTTGAAAATGATGTGAACCCAGATATCGACATGGGGCAATCCTTGCGGGCTATTCCATTTAGaataaacaaacaattaattaacatgTAA 1473 0.3978 MDSVISILLLLLTCTIIHVFSNKIRRKRNHKLPPGPSPLALVGNLYELGKKPQQTLAKLAVIHGPIMRLKLGQLTTIVISSPDIAKEVLQTHDLLFSNRTIPQATTVHNHNHYSLPFLPISPLWRDLRKICNNQLFSHESLDSSQNLRRHKLHELLNDVHTSSLSGEAVDIGTVAFRTLINFLSNTFFSLDFVNSVGDQTEEYKGIVENLVRAIATPNLVDFFPLLKLVDPQGIRKRSSTYISKLFVIFDHLIDKRLEFGGDVTNNDMLDTLLNISQEDGQKMDNKKIKHLFLDLIVAGTDSTSYAIKWAMTELINNPDAMSKAKRELEQTIGIGNPVEESDITKLTYLHAIVKETLRMHPSAPLLLPRKAKIDVEINGYTIPQGAQILINEWAIGRNPSIWDNPSLFSPERFLGSEIDVKGRHSQLTPFGGGRRICPGLPLAMKMLHLMLGSLINTFDWKLENDVNPDIDMGQSLRAIPFRINKQLINM 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1283 490 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 483 - -
Ssu8g1283 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Ssu8g1283 490 Pfam Cytochrome P450 33 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 Gene3D Cytochrome P450 18 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1283 490 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 483 - -
Ssu8g1283 490 SUPERFAMILY Cytochrome P450 33 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1283 Ssu-Chr8 23280175 23283140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1283 1 489 Cytochrome P450 AT2G45550 43.275 1.26e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1283 - - gmx:100792017 800.816