Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1265 ATGGCACCTCAATTAGCACTAACCCACTCATCTCTTCTCTGTCTTCCTCCATCTTCTGCTTCTCTCTGTTTCAGAAGgaataaatatttgattccaGAAAGATGCACCATAATCAACAGGAAAAAGAATCATGCCATCACAGCTTTTGCAGGCAATTCTCTTGGAAAATCTGCTATCCAACTCACTGCTGTTTCATCTCCACTATTTACTGATAAAGAAGCTCACCTCTCACTCAGACTTCCTAAGTCTCAAAGATGCAATTCTAAGATCTGCGGACAAGCATTTAAATATCATTCGTCTGGTTTTCGAATCCCAGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGAACTTTATCCTGTATTCCCTATCTTGTAGCATTGCAGTTTTCTGGAACTGGGATTTATCTAGAAcctttcattgaaaaatttCCGTTATTTCaggatttgatttttatatccCAGGAGCTGCCAACCGATTACCAAACTGGTTCCCTATGTTATATTGCTATGTGGCTATTGTATGGGTGGTAA 531 0.3729 MAPQLALTHSSLLCLPPSSASLCFRRNKYLIPERCTIINRKKNHAITAFAGNSLGKSAIQLTAVSSPLFTDKEAHLSLRLPKSQRCNSKICGQAFKYHSSGFRIPANAEKPEWWWRTLSCIPYLVALQFSGTGIYLEPFIEKFPLFQDLIFISQELPTDYQTGSLCYIAMWLLYGW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1265 176 Pfam Chloroplast import apparatus Tic20-like 83 155 IPR005691 -
Ssu8g1265 176 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 13 152 - -
Ssu8g1265 176 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 13 152 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1265 Ssu-Chr8 22777238 22779020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1265 103 151 Chloroplast and Mitochondria Gene Families AT4G03320 53.061 2.28e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1265 - - gmx:100790611 251.906