Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1257 ATGACGTCGGGGACGAGGCAGCCAACGTGGAAGGAGCGAGAGAACAACAAGAGGAGAGAAAGGCGAAGGCGAGCCATCGCGGCGAAGATCTTCGCCGGTCTGAGAATGTACGGAAACTACAAGCTCCCGAAGCACTGCGACAACAACGAAGTCCTCAAGGCTCTCTGCAACGAAGCCGGTTGGACGGTTGAACCTGATGGCACCACCTATCGCAAGgGAAGCAAGCCCGTTGAACGTATGGACATAGTAGGTGGTTCTGCAGCAGCAAGCCCGTGCTCATCTTTCCATCCCAGTCCCTGTGCTTCCTACAACCCAAGTCCAGGCTCTTCTTCCTTCCCTAGCCCTCGTTCATCCTCCTATGCTGCAAATCCTAATGATGGCAATTCCCTTATTCCATGGCTCAAAAACCTTTCATCCGGATCATCATCAGCATCCTCTTCCAAGCTTCCACAGCTATACATTCAAACCGGCTCCATCAGTGCTCCTGTCACTCCTCCACTCAGCTCTCCATCTGCCAGAACACCCCGAATCAAAGCTGACTGGGAGGATCAGTCCACTCGTCACATATGGGGTGGGCCACAGTACACCTTCCTGCCCTCTTCAACTCCTCCGAGCCCCGGCCGCCAGGTTGTTGACCCAGATTGGTTTGCTAAGATTAGGATTCCTCAGGGAGGACCAACTTCTCCAACCTTCAGCCTGGTCTCTTCTAACCCATTTGGCTTCAAGGAAGATGTTATGGGTGGTAGCAGTTCCCGCATGTGGACACCAGGGCAAAGTGGGACATGTTCTCCAGCTGTAGCTGCAGGCTCTGACCACACTGCTGACATTCCAATGGCTGAAGCGGTCTCAGATGAATTTGCCTTTGGAAGCAGCGCAGCAGGCGTAGTGAAGCCCTGGAAAGGAGAGAGGATCCATGTCCATGAAGATTTCGGATCAGATGATCTTGAGCTCACTCTTGGGAGCTCAAAGACCAGGTCTACATAA 984 0.5315 MTSGTRQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGSKPVERMDIVGGSAAASPCSSFHPSPCASYNPSPGSSSFPSPRSSSYAANPNDGNSLIPWLKNLSSGSSSASSSKLPQLYIQTGSISAPVTPPLSSPSARTPRIKADWEDQSTRHIWGGPQYTFLPSSTPPSPGRQVVDPDWFAKIRIPQGGPTSPTFSLVSSNPFGFKEDVMGGSSSRMWTPGQSGTCSPAVAAGSDHTADIPMAEAVSDEFAFGSSAAGVVKPWKGERIHVHEDFGSDDLELTLGSSKTRST 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1257 327 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
Ssu8g1257 327 MobiDBLite consensus disorder prediction 1 22 - -
Ssu8g1257 327 MobiDBLite consensus disorder prediction 98 123 - -
Ssu8g1257 327 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 326 - -
Ssu8g1257 327 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 138 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1257 Ssu-Chr8 22490952 22494676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1257 1 325 BZR Transcription Factor Family AT1G78700 69.940 4.68e-133 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Ssu8g1257 BES1_N 2.7e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1257 - - mnt:21400544 521.931