Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1227 atGATAACCATTCGTGTAgatgaaattagtaaaattatctGTGAATGCATTGAGCAATATAATACCGaagtaaaaattgtaaatacgGGTACCGTCCTTCAAGTAGGCGATGGTATTGCTTGTATTTATGGTCTTGATGAAGTAATGGCGGGTGAATTAGTGGGATTTGAAGAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAACAAAGCAATACCACGAAGAAAACTTAACCGTGTAACCGGTAAAGATTCTGCAGAAACCTCTGAATCAGGTGACATGGAGCTCAGAGAACCTGAGGAGCTACGAGCTGAGCCTCTAAGAGTTCAACAACAACTCTTGGATGATGAAACACGTGCCCTTCagGTGGAATTGACTAGTCTTCTCGATACAGTTCAAGAAACCAAAACTAAGATGGTGGAAATGTCTGCACTAAATCACCTCATGTCTACACATGTTTTGCAACCAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCCGTTGAAGCTACTAAGAATGTGGAGCTTGGTAACAAAGAACTCTCAAAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTATTTGTACTTACTTTTTCGATCCACTTTCTTGATTGGTATAGTTAA 651 0.3902 MITIRVDEISKIICECIEQYNTEVKIVNTGTVLQVGDGIACIYGLDEVMAGELVGFEEFDQLRAVRFQDAINKAIPRRKLNRVTGKDSAETSESGDMELREPEELRAEPLRVQQQLLDDETRALQVELTSLLDTVQETKTKMVEMSALNHLMSTHVLQPAQQIEHLYEQAVEATKNVELGNKELSKAIQRNSSSRTFLLLFLFVLTFSIHFLDWYS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1227 216 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 58 IPR036121 GO:0046034|GO:1902600
Ssu8g1227 216 MobiDBLite consensus disorder prediction 82 103 - -
Ssu8g1227 216 Gene3D - 119 212 - -
Ssu8g1227 216 Gene3D - 2 73 IPR023366 -
Ssu8g1227 216 PANTHER SYNTAXIN-18 57 216 - -
Ssu8g1227 216 PANTHER SYNTAXIN-18 57 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1227 Ssu-Chr8 21847936 21849398 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1227 36 216 SNARE and Associated Proteins AT1G51740 65.027 1.38e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1227 K08492 - gmx:100778011 265.388