Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1210 ATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGATCGCGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAGGAGGAGTCGAAAGGGAATGAGTTGCATGTTAAGCGTATCAGGGATTACAGGCACAAGGTGGAGCTGGAGCTGTCCAACATTTGCGGTGACATTATGATAGTTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAAAATggtaatgaaaagaaagaggtGGCAGATCAGTCACTTAAAGCATATCAGACAGCTTCTACCACTGCTGAGAGTGAATTACAACCTACACATCCTATTCGTTTGGGTCTGGTTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTGGGCACCCTGAATGAGGAATCTTACAAGGACAGTACCTTGATTATGCAGCTGTTGAGAGATAACCTTACTTTATGGACTTCTGATATCCCCGAAGAGGGTGAGGACCAAAAAATGGAAAGCACAGCCAGGAGTGGTCAGGGAGAAGATGAGTTAGGCCGCTAA 714 0.4328 MVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELHVKRIRDYRHKVELELSNICGDIMIVLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKNGNEKKEVADQSLKAYQTASTTAESELQPTHPIRLGLVLNFSVFYYEIMNSPERACHLAKQAFDDAVSELGTLNEESYKDSTLIMQLLRDNLTLWTSDIPEEGEDQKMESTARSGQGEDELGR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1210 237 MobiDBLite consensus disorder prediction 214 237 - -
Ssu8g1210 237 Pfam 14-3-3 protein 1 210 IPR023410 -
Ssu8g1210 237 PANTHER GENERAL REGULATORY FACTOR 2 1 237 - -
Ssu8g1210 237 PIRSF 14-3-3 1 223 IPR000308 -
Ssu8g1210 237 SUPERFAMILY 14-3-3 protein 2 218 IPR036815 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Ssu8g1210 237 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Ssu8g1210 237 MobiDBLite consensus disorder prediction 213 237 - -
Ssu8g1210 237 SMART 1433_4 1 223 IPR023410 -
Ssu8g1210 237 Gene3D - 1 225 IPR036815 -
Ssu8g1210 237 PANTHER 14-3-3 PROTEIN 1 237 IPR000308 -
Ssu8g1210 237 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1210 Ssu-Chr8 21572002 21575236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1210 1 234 14-3-3 family AT2G42590 76.695 2.80e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1210 K06630 - gmx:100806167 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1210 8 21572002 21575236 Ssu8g1210 8 21572002 21575236 ECH