Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1200 ATGTTGATCAACAACGAAATAGAGGATTTATGTGATGATAACTTTGAAGGATCTAATGAAGAAAGACAGATTTTTTCAGAGGTCTTTTCTGGTAATGACATTTTTCAGTCTAGTCAGAAGTGTCTTGTTCCTGGAGCTATCAGCTTTGAACATGAATccactaaaaacacatttaaatcATTCTGCTCTAGCAATGAAAACTCAGTTGTATTGCATCCCTCGTCTTCAAGACTTACACATGCTGAGGAGGATTTTAATGTAATTCAGCATTTCAAAGAGACTGCTCTGGGGTGTGTGCCAGAGAGTTTCATTTGTGATGACCAGAATGATGAGGATGTGAATGTCAAACGTATGAAGTTTTCACTGCATGAACTTGCTTGTAGTAGATCTGATTCAGAAAAAAATTTGAGTCCATCACGACTTTCAAAAGTAGTAGTTTCTAACCTGTCTCGTGCTGCTACTGACTGTGATAGTGAATCAATTGCATTTCGTTTAGTTGAATCATCTAAACATGGTGTGATATCTAGTTGTTATCTATTGAACCATAATGTGTTAAATAAACAAGCTGCTAAGGATGATGTAGatgttacaaattttaactCAACAACAGCAAATGGGAATTCTGCAAAAGAGGTGTCTGTAAGTAAAGCAGCTGCTTCTCCTGTTTCCCAGGAGAGCTTTGCAAACAGGCTAGTAGTTACAAGTCCATCAGCCACTGTTGTGAAGAAGTCTGGGTCTCCTTTAAATCCTGAGGAAGTGCCAGAATCTTCTAATGTGGATATCTTGAATTCATCCTCAAAGATAGAGGAAGAGGACCCTCGTACTATACTGCAGTTTCATATTACACAGTTGCTTAGGATGGCAGGATGGTCTATTGAGAAGCGTCAACGACCTAGTAGGCGTTACAAGGAGTCAGTTTACAGGACACCAGAGGGAAAGCCAATTCGGGAGTTTACAACAGCTTGGAGATTATGTGGTCAGCTATTATCTGTTGAAAATTGCAATTTAATGTATGGAGATTATAAGGAATGGACTGATATTAGTCAATTCTGGTCTGATCTATCCAGTGCACTGATAAATGTTGAAAAAACAATGACCCAGTCAGAAGACCCTGCTGCTATATTGGCTTATCAATGGTCGCTTTTGGATCCTTTTGTAGTAGTTATATTTGTTGATAGAAAGATTGGTGCGCTGAAAAGGGGAGAGGTAGTGAAAGCAACTTGGAGTTTAGTTTCCAGTAAGTACAAGGTGGCATATGCTCCCATTGATTCAAGCTCTGGAAATTCGAATCAGTTATCTGCAGTGTCTAACATAAATGCTGTTCATCAAGCCAAAACTAGAAATTCCAAAAGTGTTGATAAACAGAGTTCAGAAAATTATCTGGAAACAACTAAAATTATCGGTGGAGATGTGCCAATGGACATGTCAGAGGAAAATAATGCATATGGTGTGAGCCATGGCCTGGTTCATTCTCATGACTCAAGGGCTATGCAACAGTCTGAATGTAGTGAGGAAGAGGGTGGGAAAATCTCAGTAGCTTCTCTATTTGGGAAAGATAACACATATTCTGATTCTAATGTTATTCCTAAAAGGAAAATGCGGAGGAAGTGTAAAAGGGTATCTCAAATCAAACTGAGTATGTTCTACCATAGTGACATGCTGGGCTCAACTGTTACTGACCAGGTGCAGTCAATAAATGGTGAAGCATGTGGGTTGGAAGAGGTCCAGGATTATCTTGTTGACAATGCGGGAAAGAAAAGAAGCTGCAGAAAGTTATCATCTGTCAGTGCAATCCAGAGAAATATTAGGAAAACAAACTGCTCCATAACTGGAACAGATAAGTCTAACAGATGCCAGATTAAAGATGATGATTTATTGGTGTCCGCAATATTCAGGAATAAGGACTTCAGCCAAAGACAAGCCAGGGTAATTCTAGTGCTAAATCCTGCAAATCAAGGGGCCAGAGAAAGCTTAAAAGCCAAAAGGGCCGTTGCGGGTTGCTACCAAGGAACCCCTGTAATGGAGGGAAGCACAATAAGGACTGCAATAGGTTTTATTTGGGTGCAAGGACAATCTTGTCCTGGTTGA 2088 0.3922 MLINNEIEDLCDDNFEGSNEERQIFSEVFSGNDIFQSSQKCLVPGAISFEHESTKNTFKSFCSSNENSVVLHPSSSRLTHAEEDFNVIQHFKETALGCVPESFICDDQNDEDVNVKRMKFSLHELACSRSDSEKNLSPSRLSKVVVSNLSRAATDCDSESIAFRLVESSKHGVISSCYLLNHNVLNKQAAKDDVDVTNFNSTTANGNSAKEVSVSKAAASPVSQESFANRLVVTSPSATVVKKSGSPLNPEEVPESSNVDILNSSSKIEEEDPRTILQFHITQLLRMAGWSIEKRQRPSRRYKESVYRTPEGKPIREFTTAWRLCGQLLSVENCNLMYGDYKEWTDISQFWSDLSSALINVEKTMTQSEDPAAILAYQWSLLDPFVVVIFVDRKIGALKRGEVVKATWSLVSSKYKVAYAPIDSSSGNSNQLSAVSNINAVHQAKTRNSKSVDKQSSENYLETTKIIGGDVPMDMSEENNAYGVSHGLVHSHDSRAMQQSECSEEEGGKISVASLFGKDNTYSDSNVIPKRKMRRKCKRVSQIKLSMFYHSDMLGSTVTDQVQSINGEACGLEEVQDYLVDNAGKKRSCRKLSSVSAIQRNIRKTNCSITGTDKSNRCQIKDDDLLVSAIFRNKDFSQRQARVILVLNPANQGARESLKAKRAVAGCYQGTPVMEGSTIRTAIGFIWVQGQSCPG 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1200 695 MobiDBLite consensus disorder prediction 239 259 - -
Ssu8g1200 695 PANTHER PHD FINGER PROTEIN 12 1 461 IPR042163 GO:0003714|GO:0045892
Ssu8g1200 695 PANTHER PHD FINGER PROTEIN 12 461 649 IPR042163 GO:0003714|GO:0045892
Ssu8g1200 695 PANTHER INCREASED DNA METHYLATION 1 1 461 - -
Ssu8g1200 695 PANTHER INCREASED DNA METHYLATION 1 461 649 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1200 1 634 PHD Transcription Factor Family AT3G14980 28.571 3.57e-51 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1200 - - gmx:100777440 1072.77