Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1194 ATGGGTCCGAAGAAATGGTTTAAGATAATAGTCAAACTGAAGAAATCTAaggtcaaaaaagaaaagACCACTACTGAAAATTCAAAGGAATACTCCAACGGGAAGCAAAGTACTCGTGAAGAGTCAAGTAGCATTCCCAGTGAAGGTTTGATGATGGACCGGACTGTTCCATCGAGGTTGATAGACGATATTGCAGCTACTCGGATTCAAAATGCATTTCGTTCGTTTATGGCAAGAAGAACATTACACCATCTAAGGGGAGCAGTGAAATTCGAGGCTTTAATTCAAGATCACCTGGCCAGAGAGCAAACAGCAACTGCACTAAGCTATATACATTCATGGAGCAGAATACAAGAACAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCCAGGATTAAGCAAAAGAAATTGGAAAACCAGTTAAAACTTGAGGCTAAGATTCATGAGCTCGAGGTGGAATGGTGCAGTGGTTCTGAAACCATGGAAGAGATACTTTCTAGGTTACATCAGCGAGAGGAAGCAGCAATTAAACGAGAGAGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCTTACAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACGGAGCGTTGGGTTGCAGCACGTCCTTGGGAAGTGCGGGTTCGAGTTCAATCCACCAGAACAAAGGAACTCAATGGCCAGCAGCAAAAAACCAAATTAGATAAGATGAACCATAATGAAAGCAAAGCAGCCTTGGCTAAACATGCCCTGTCAAACGGGAAGGAGCCTGGGAAAGCAAAGGAAAACGGTACTTCAGGGCTGTCAAAGAACCATGTATCCAAATAG 873 0.4296 MGPKKWFKIIVKLKKSKVKKEKTTTENSKEYSNGKQSTREESSSIPSEGLMMDRTVPSRLIDDIAATRIQNAFRSFMARRTLHHLRGAVKFEALIQDHLAREQTATALSYIHSWSRIQEQIRARRICMITEARIKQKKLENQLKLEAKIHELEVEWCSGSETMEEILSRLHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVRVRVQSTRTKELNGQQQKTKLDKMNHNESKAALAKHALSNGKEPGKAKENGTSGLSKNHVSK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1194 290 PANTHER IQ-DOMAIN 10 1 281 - -
Ssu8g1194 290 MobiDBLite consensus disorder prediction 243 258 - -
Ssu8g1194 290 MobiDBLite consensus disorder prediction 16 49 - -
Ssu8g1194 290 ProSiteProfiles IQ motif profile. 65 90 IPR000048 GO:0005515
Ssu8g1194 290 PANTHER IQ-DOMAIN 5-RELATED 1 281 - -
Ssu8g1194 290 MobiDBLite consensus disorder prediction 19 36 - -
Ssu8g1194 290 Coils Coil 135 155 - -
Ssu8g1194 290 MobiDBLite consensus disorder prediction 236 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1194 Ssu-Chr8 21319739 21322544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1194 58 273 IQD Protein Family AT3G15050 54.630 7.74e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1194 - - gmx:100809360 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1194 8 21319739 21322544 Ssu3g1733 3 52834542 52837187 ECH
Ssu8g1194 8 21319739 21322544 Ssu8g1194 8 21319739 21322544 ECH