Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1187 ATGGCACAGTTACCTCCAAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCCACAATGGCCAACTTCAATCCTACCACCACCCCCGCCGCCGCCACCACTCCCCCGCCGCCGTCATGGGTCGACGAGTTCCTCGACTTCTCGTCGGCCCGGCGGGGTGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAGTGTCGAGCCGGGTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCCGACGACATTGCCGCCGCGGCTCTGCTGCCGCCGCCGCCACCGTCGTCGGCCTCCGACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGACGAGAAGCCGATGGCAATGGCGTTGGACGTGAAGCCTAAGACGGAAACCGAGGAAAGCCCGTGCAAGAATGAGGCGGCGGCGCCGCCATCCTTCGCCACCGCCACCTACGCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCGGCTCAGAGGTCAAGGGTAAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTGTCACCGCGAGTTGCATTCCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGGATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATtaaagaaggaaatagagagaCTGAGGCAAATCTATCACCAACAGAACCTACAAAAGATGAATAACTCAGTGAACAACAACCTTCAATCCCCACCAACATCACAGGCACAACCATCAATGCAACCACacaatcttcatcttcatcagcAGCAGCTAACAATCTCTCAACCATTGGGACGCAaggacaaggagcagctcctcAGTTGA 969 0.516 MAQLPPKIPTIPQNWPSFPHQRVPTMANFNPTTTPAAATTPPPPSWVDEFLDFSSARRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALLPPPPPSSASDPSSPSSDQNSNNDEKPMAMALDVKPKTETEESPCKNEAAAPPSFATATYAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMNNSVNNNLQSPPTSQAQPSMQPHNLHLHQQQLTISQPLGRKDKEQLLS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1187 322 MobiDBLite consensus disorder prediction 117 131 - -
Ssu8g1187 322 MobiDBLite consensus disorder prediction 276 296 - -
Ssu8g1187 322 PANTHER BASIC LEUCINE ZIPPER 2 1 290 - -
Ssu8g1187 322 MobiDBLite consensus disorder prediction 103 131 - -
Ssu8g1187 322 MobiDBLite consensus disorder prediction 1 45 - -
Ssu8g1187 322 CDD bZIP_plant_RF2 174 224 IPR044759 GO:0003700|GO:0006355
Ssu8g1187 322 Coils Coil 252 272 - -
Ssu8g1187 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Ssu8g1187 322 MobiDBLite consensus disorder prediction 14 35 - -
Ssu8g1187 322 Pfam bZIP transcription factor 173 218 IPR004827 GO:0003700|GO:0006355
Ssu8g1187 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 223 IPR004827 GO:0003700|GO:0006355
Ssu8g1187 322 Gene3D - 172 244 - -
Ssu8g1187 322 SUPERFAMILY Leucine zipper domain 173 227 IPR046347 GO:0003700|GO:0006355
Ssu8g1187 322 PANTHER BASIC LEUCINE ZIPPER 34 1 290 - -
Ssu8g1187 322 SMART brlzneu 169 233 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1187 Ssu-Chr8 21162945 21165911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1187 1 251 bZIP Transcription Factor Family AT3G58120 52.465 1.12e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu8g1187 bZIP_1 1.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1187 - - gmx:100820197 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1187 8 21162945 21165911 Ssu8g1187 8 21162945 21165911 ECH