Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1137 ATGGAGAAGAAATCTCTAGCTGGATTGtgcttcctcttcctccttctctttgtTGCTCAAGTTGTGGTGCAAACTGAGGTAAATACTTGCGAGAACCTGGCTGATACATACAAGGGTCCATGCTTCTCCACCGCCAGCTGCGATGATCACTGCAAGAATAAAGAACACTTACTCAGCGGCAGATGCAGGGACGATGTTCGCTGTTGGTGCACCAGAAACTGTTAA 225 0.4222 MEKKSLAGLCFLFLLLFVAQVVVQTEVNTCENLADTYKGPCFSTASCDDHCKNKEHLLSGRCRDDVRCWCTRNC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1137 74 Gene3D - 28 74 IPR036574 -
Ssu8g1137 74 Pfam Gamma-thionin family 29 74 - -
Ssu8g1137 74 PANTHER DEFENSIN 1 74 - -
Ssu8g1137 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Ssu8g1137 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Ssu8g1137 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1137 Ssu-Chr8 20197968 20199050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1137 12 74 Plant Defensins Gene Families AT2G02130 40.909 3.04e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1137 - - gmx:100779239 124.405