Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1102 ATGGTGTTGATGAAACTTGTAAAGTGGGTTTCctttgttttggttgtttatttgtttttggtggAAGGGTCATTTGCCACATTCACTCCTCGTGACAATTATCTAATTGCTTGTGGTTCCTCCCAAAGTATCACTTTCCAAGATCGCACTTTCGTTCCTGATTCACGGCATTCTTCACTGGTGTTGAAAACCGGGTATTCTGTTGTTGCTAGTTCCAATTCTAGTAGTGTTCCATTCCCAATATACCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGATTTGAGGTTGAAGAAGGTAGGCACTGGCTCAGGctatatttttctcctcttccCAACTCTGCCCATAATTTGACTGCTGCTGCTATAACAGTGGTCACTGATGATTTTGTTCTCTTGTGCAACTTCACCTTTAGGAACTACAATGGTTCTTATATGTTTAGGGAGTATGCTATCAATGTTACTTCTAACTCCTTTACTGTCACCTTCATTCCTTCAAATGGTTCAGTGGCCTTTGTCAATGCAATTGAAGTTGTGTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGGGGTCCCTTGCTCACTCCCCAAAATGACACCCTGGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTGAATAGTTCAGTCACTAATGTGTCAGTCAACCCTTCCAGCATTAAGTATCCGGCGGGTGTTACGCCTGAGACAGCACCAAATTGGGTCTATGCCACTTCTGAAGCCATGGGGGATGCAAATGTAGCCGACTCAAATTTCAACATTACTTGGGTCTTTACTGTGGATCCAAACTTCTCCTATTTTATCCGGGTGCACTTTTGTGATATTATTAGCAAGTCTCTCAACACTTTAGTGTTCAATCTATTCATAAATTCTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATAACTAATGATTTGGCAGTGCCTTATTATAAGGATTTTGTTTCCAATGCTTCAGCAGACTCCAACACTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGATATCACAAATGCCACTATGAATGGACTGGAGATTATAAAGATCAGCAATGAATTCAAAAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTCCTTCCTAGTTCACCATCAAGCAAAAGCAAGGGGGGGATCATAGTTGGTTCTTCTGTTGGGGCTGTGGCTACCATAGCTTTGGTTGGTTTGTGTTATTGCTGCATGGTGAGATGCAAATCAAAGTCTACTCTACAGGGCCATCCTTGGCTGCCTTTACCCTTATATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCACAAAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTTGGACGGTTCTTCACTTTCCAAGAGATCCTAGATGCAACCAACAAATTTGATGAGAAGCTGCTTCTTGGTGTTGGTGGTTTTGGCAGGGTTTATAAAGGAACACTTGAAGATGGGACCAATGTAGCTGTTAAAAGGGGGAATCCCAGATCAGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCACCGCCATCTTGTGTCCCTCATTGGCTATTGTGATGAGAGATCGGAAATGATTCTCGTGTATGAATACATGGCTAATGGACCTCTCAGGAGTCATTTGTATGGAACTGACCTACCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCGGCAAGAGGTCTTCATTATCTCCACACTGGTGCATCTCAAAGCATAATTCACCGAGATGTAAAGACAACTAACATCCTCTTAGATGATAACTTTGTTGCTAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGCCCTGCTCTTGATCAGACTCACGTGAGCACTGCTGTTAAGGGTAGTTTCGGTTATCTGGATCCCGAATACTTTAGAAGGCAACAGCTTACAGAGAAATCAGATGTTTATTCATTTGGAGTAGTTTTAATGGAAGTGTTATGCACAAGACCAGCATTGAACCCTGTCCTTCCTAGGGAGCAAGTAAACATAGCTGAGTGGGCAATGACCTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAGAATCTGGTGGGGAAAGTCAATCCTGCTTCTCTTAAGAAGTTTGGGGAGACTAGCTGA 2256 0.418 MVLMKLVKWVSFVLVVYLFLVEGSFATFTPRDNYLIACGSSQSITFQDRTFVPDSRHSSLVLKTGYSVVASSNSSSVPFPIYQSARIFTEKASYRFEVEEGRHWLRLYFSPLPNSAHNLTAAAITVVTDDFVLLCNFTFRNYNGSYMFREYAINVTSNSFTVTFIPSNGSVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVTNVSVNPSSIKYPAGVTPETAPNWVYATSEAMGDANVADSNFNITWVFTVDPNFSYFIRVHFCDIISKSLNTLVFNLFINSDIALGSLDLSSITNDLAVPYYKDFVSNASADSNTLTVSVGPDTMADITNATMNGLEIIKISNEFKSLDGLSSVESLLPSSPSSKSKGGIIVGSSVGAVATIALVGLCYCCMVRCKSKSTLQGHPWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVNPASLKKFGETS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1102 751 CDD STKc_IRAK 508 740 - -
Ssu8g1102 751 SMART serkin_6 502 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1102 751 Pfam Protein tyrosine and serine/threonine kinase 507 699 IPR001245 GO:0004672|GO:0006468
Ssu8g1102 751 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Ssu8g1102 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Ssu8g1102 751 Gene3D - 206 388 - -
Ssu8g1102 751 Gene3D - 33 183 - -
Ssu8g1102 751 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Ssu8g1102 751 PANTHER OS07G0166700 PROTEIN 20 750 IPR045272 GO:0004714|GO:0006468
Ssu8g1102 751 Gene3D Transferase(Phosphotransferase) domain 1 578 750 - -
Ssu8g1102 751 ProSiteProfiles Protein kinase domain profile. 502 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1102 751 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 750 - -
Ssu8g1102 751 Pfam Malectin-like domain 36 385 IPR024788 -
Ssu8g1102 751 SUPERFAMILY Protein kinase-like (PK-like) 480 746 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1102 Ssu-Chr8 19352026 19354281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1102 26 751 Receptor kinase-like Gene Family AT2G21480 53.045 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu8g1102 Malectin_like 1.3e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1102 - - gmx:100809700 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1102 8 19352026 19354281 Ssu8g1102 8 19352026 19354281 ECH