Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1074 ATGGCCTCTGAGAACACCATGTTCCATGAGGAAGAATCCAAGGATGAAGCTGGAAGAAGCAGAAGCAGGAGCAGGAGGGCCAGTGGGAAGGGTCCAAAGAAGCCACCACAGAGAGGTTTGGGTGTGGCTCAGTTGGAGAGGTTAAGGATTCAAGAGTCTTGGAAGAAGATGAGTGAAGATTCTGGAGTACTACCAGTACCAAACTTCAatgatcatcatcatcatcaccttGTTCAGTGTCAACCTCCTCCAATGTTTGCCAGTGGCAGTCTTCCTGTGAGGTATGGAGCACCTGCACCCTCATTAAACCTTGGCTTTCAGTGTCCTCAACAACATGTGATCAATGGCAACAACACTATTGGTGGGGGGTGGATGCTTCCTAACAGGGTTGGTTCCTATGGATCTGGGGCCCCACTTTTGGTTGGAACCCCAATTGAGACCTCGAAAGAGCTCTCTTCAATTCCAAATCTGTATTCTGAACCTGAGTGTTTTGATGTTTGCCTCAAgAAAACACGTTTCAACGAGGACAATGAAAAGGGATCAAATGCAAGGAGAGAGAGGCCTTTGGAGAGGTGGTCCAATGGCCATGATTTTCTCGGATTTATGGCCCAATCTGCTGCCCCAAGTCTTGTTGGGGAAACCAGTGATTTCTATAACAAATTGGCCAAGCATGATGCTGCTAGTACTTATGCTTGTGCTACTCCTAATGATGAGTGTGCGGAGGTTGTTGCGGTTCACAGGAGGGGAAACTCAGTGAGTGGCAGGGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATAGCAGAGGCAGTGCTTCCATGGAGCTGGAATTGCCCACAATAGGTTCAGTTGCAGTAGGTGGTGAAGCTTCTTCTATCACTGCTACAGCCTATGGAGATTCTGCTTCTAATTCTGTTGATTTGTCTCTGAAGCTTTCACGCTAG 945 0.4624 MASENTMFHEEESKDEAGRSRSRSRRASGKGPKKPPQRGLGVAQLERLRIQESWKKMSEDSGVLPVPNFNDHHHHHLVQCQPPPMFASGSLPVRYGAPAPSLNLGFQCPQQHVINGNNTIGGGWMLPNRVGSYGSGAPLLVGTPIETSKELSSIPNLYSEPECFDVCLKKTRFNEDNEKGSNARRERPLERWSNGHDFLGFMAQSAAPSLVGETSDFYNKLAKHDAASTYACATPNDECAEVVAVHRRGNSVSGRVFMEYEFFPGKDSRGSASMELELPTIGSVAVGGEASSITATAYGDSASNSVDLSLKLSR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1074 314 PANTHER PROTEIN SPOROCYTELESS 12 313 IPR014855 GO:0003700
Ssu8g1074 314 Pfam Plant transcription factor NOZZLE 19 178 IPR014855 GO:0003700
Ssu8g1074 314 MobiDBLite consensus disorder prediction 1 23 - -
Ssu8g1074 314 MobiDBLite consensus disorder prediction 1 45 - -
Ssu8g1074 314 PANTHER OS01G0212500 PROTEIN 12 313 IPR040356 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1074 Ssu-Chr8 18898348 18899679 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Ssu8g1074 NOZZLE 7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1074 - - lang:109348179 270.781