Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1072 ATGGCCTCTGAGAACACCATGTTCCATGAGGAAGAATCCAAGGATGAAGCTGGAAGAAGCAGGAGCAGGAGCAGGAGGGCCAATGGGAAGGGTCCAAAGAAGCCACCCCAGAGAGGTTTGGGTGTGGCTCAGTTGGAGAGGCTAAGGATTCAAGAGTCTTGGAAGAAGATGAGTGAAGGTTCTGGTGAACTACCAGTACCAAACTTCAATGATCATCATCACCTTGTTCAGTGCCACCCTCCTCCAATGTTTGCCAGTGGCAGTGTTCCTGTGAGGTATGGTGCACCCTCATCAAACCATTCCTTTCAGTTTCAGTGTCTTCAACAACATGTGATCAATGGCAACAACGCTATTGGTGGGGGTTGGATACTTCCTAACATGGTTGGTTCCTACGGATCTGGGCCTCCACTTTTGGTTGGAACCCCTCTTGAGACCTCGAAAGAGCTCTCTTCAATTCCAAATCTGTATTCTGAATCTGAGTGTTTTGATGTTTGCCTCAAgAAAACACGTTTCAACGAGGACAATGAAAAGGGATCAAATGCAAGAAAAGAGAGGCCTTTGGAGATATGGTCCAATGGCCATGATTTTCTGGGATTTATGCCCCAATCTGCTGCTCCAAGCCTTGTTGGGGAAACCAGTGATTTCTATAACAAACTGGCCAGGCATGATGCTGCTAGTGCTTATGCTTGTGCTACTCCCAATGATGAGTGTGCGGAGGTTGTTGCGGTTCACAGGAGGGGAAACTCATTGAGTGGCGGGGTTTTCATGGAATATGAGTTTTTCCCGGGAAAAGATAGTAGAGGCACTGCTTCCAAGGAGCTGGAATTGCCCACAATAGGTTCAGTTGCAGTAGGTGGTGAAGCTTCTTCTATCACTGCTACAACCTATGGAGATTCTGCTTCTAATTCTGTTGATTTGTCTCTGAAGCTTTCTCGCTAG 939 0.4707 MASENTMFHEEESKDEAGRSRSRSRRANGKGPKKPPQRGLGVAQLERLRIQESWKKMSEGSGELPVPNFNDHHHLVQCHPPPMFASGSVPVRYGAPSSNHSFQFQCLQQHVINGNNAIGGGWILPNMVGSYGSGPPLLVGTPLETSKELSSIPNLYSESECFDVCLKKTRFNEDNEKGSNARKERPLEIWSNGHDFLGFMPQSAAPSLVGETSDFYNKLARHDAASAYACATPNDECAEVVAVHRRGNSLSGGVFMEYEFFPGKDSRGTASKELELPTIGSVAVGGEASSITATTYGDSASNSVDLSLKLSR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1072 312 Pfam Plant transcription factor NOZZLE 19 176 IPR014855 GO:0003700
Ssu8g1072 312 PANTHER OS01G0212500 PROTEIN 12 311 IPR040356 GO:0003700
Ssu8g1072 312 PANTHER PROTEIN SPOROCYTELESS 12 311 IPR014855 GO:0003700
Ssu8g1072 312 MobiDBLite consensus disorder prediction 1 23 - -
Ssu8g1072 312 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1072 Ssu-Chr8 18824217 18825534 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Ssu8g1072 NOZZLE 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1072 - - cam:105852312 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1072 8 18824217 18825534 Ssu8g1072 8 18824217 18825534 ECH