Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1051 ATGGCACCAGAATATGCAACTGACGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTTTATTGATGGAGATCATATCTGGGAAGAGAAGTAGAGGATATTATAATCAGAACCACAGCCAAAATCTCATAGGCCATGCATGGAAACTCTGGAAAGAAGGAAGACTACTCGAACTGGTTGATAAAAGCATAGAAAACTCTAGTTTTCTATCACAAATATTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGCATCCAGAGGATAGGCCTGGAATGTCCTATGTGCTCCTAATGTTAGTGAGTGAGCTTGAATTGCCTGAGCCAAAACAGCCAGGATTCTTTGGAAAATATTCAGGTGAAGCAGACTCATCCACAAGTAAGCAGCAATTAAGTTCAACAAATGAAATAACCATTACCTTATTAGAAGCCCGTTGA 447 0.3937 MAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNHSQNLIGHAWKLWKEGRLLELVDKSIENSSFLSQILHCIHVSLLCVQQHPEDRPGMSYVLLMLVSELELPEPKQPGFFGKYSGEADSSTSKQQLSSTNEITITLLEAR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1051 148 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 147 - -
Ssu8g1051 148 Pfam Domain of unknown function (DUF3403) 106 148 IPR021820 GO:0004674
Ssu8g1051 148 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 147 - -
Ssu8g1051 148 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Ssu8g1051 148 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1051 148 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
Ssu8g1051 148 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1051 Ssu-Chr8 18187531 18188066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1051 1 148 Receptor kinase-like Gene Family AT4G23150 43.226 1.89e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu8g1051 PK_Tyr_Ser-Thr 1.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1051 - - gmx:100778155 281.952