Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1032 ATGGTGGGAACTCCAATTAACGGAAGAACAAGGCCAGCTTTTGCTGTTGTAAATGGTGGTGGCCATGATCTTGGCCCTAGTAGTGCTCCACCGAGCAATGCTGGGTCAGATTATGGCATTATAGAGTTCACAAGAGAGGATGTGGAGGCCTTGATGAATGAGAAGGCCAAAAGGAAGGACAGATTTAATTATAAGGAAAGATGTGAAAATATGATGGATTATATAAAAAGGCTGAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGATTAGCTACTCACTGGAGCAAGAAAAGTTGAAGAATTCATTGGAATTAGCCCAGCAAAAATGCACGGAAATAGAGTTGCTACTCGAAATCAAGGAAGAAGAGCTAAACTCAATTATTGTGGAAATGAGAAGAAACTGCACTTCTTTACAAGAGAAATTAGTGAAGGAAGAATCAGAAAAAACAGCGGCAATGGACTCTCTTGTTACAGAGAGAGAGGCTAGGCTTAACTTTGAGAGGTCACAGAATACACTACAGGAGGATCTTGGGAGAGCACAGCGAGAGCTCCAAAGTGCAAATCAAAAGATATCATCACTCAACGACATGTATAAGCGGTTACAAGATTACATAACAAGCTTACAACAGTACAATGGAAAACTCCATTCTGAGCTTTCTTCAGTTGAAAATGAACTTAAGCGtgtagagaaagagaaaggtaCTGTAGTGGAGAACCTTACCATGTTAAGGGGCCAGCTTACTTTGTCTATGTCTTCTCAAGAAGAGGCCACAAAACAGAAGGATGCCTTGGCTAGTGAAGTTACATCTCTTCGAGTAGAGTTGCAACAAGTGAGGGATGATCGAGACTGCCAATTATCTCAAGTGCAAACTTTAAGTTCTGAATTAGAGAAGTTTAAAGATTCTACAGAAAAGTCCTGCTCAGAACTGAACAACTTGACTATAAGAACAAATGAACTGGAGGCAAAATGTGCTTTGCAAGATGAGCGGATAAAGGTACTACAAGAGCAGTTAACTACTGCAGAGGAGAAACTGCAGGTTTCTGACATATCTGCAAGTGAGACAAGAACAGAGTATGAAGGGCAACAAAAACTTGTACTTGAGTTGCAAAGACGTTTGGCAGACGCAGAATATAAAGTTATAGAAGGGGAGAAGCTAAGGAAAGAATTACACAATACCATTTTGGAACTCAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGGCCTTTGTTGCCTGATGAAGGTTGTAGCACAGAAGGAAAGGTTATATCTTATCCCACATCGATGGAAGCTTCTGGACGGGGCGTTGAATTGACACAAAGTGGCCAAAAACATTCTTTCACATTTGATAAAGTTTTTGCACCTGATGCATCACAAGAAGAGGTTTTTATCGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGCCAGACAGGGTCAGGGAAAACTTATACGATGATGGGCAGGCCCGGACATCCAGAAGAAAAGGGCTTGATACCTCGTTCACTAgaacaaatatttcaagcaaaaCAGTCTCAGCAACCCCAAGGCTGGAAATACGAAATGCAGGTGTCGATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTATCTACAAATAAGTCATCATCAGATGCAACACCAACACGCATGGAAAATGGTACTCCTGGGAAGCAATACACAATCAAACATGATGCCAATGGAAATACACACGTTTCTGATCTCACAGTAGTGGATGTTCAGAGTGTAAAAGAGGTTGCATTTCTTCTAAATCAAGCTGCAAATAGCAGatcTGTGGGAAAAACTCAAATGAATGAACAATCTTCTAGAAGTCATTTTGTATTCACTCTACGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTATTCTAAACCTCATAGATCTTGCTGGGAGTGAGCGTCTTTCAAGGAGCGGGTCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTCTGTCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGAGGATCATGTCCCATTCAGGAACTCAAAGCTTACATACCTACTTCAGCCTTGTCTTGGTGGGGACTCAAAGACATTAATGTTTGTAAACATCTCTCCTGACCATGCTTCAGCTGGAGAGTCACTATGCTCACTCCGGTTTGCCTCAAGAGTGAATGCTTGTGAAATTGGGACACCTCGCCGTCACACCAATGGACGCCCTATAGAATCTCGCTTGACCTATTTCTAA 2292 0.4088 MVGTPINGRTRPAFAVVNGGGHDLGPSSAPPSNAGSDYGIIEFTREDVEALMNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEISYSLEQEKLKNSLELAQQKCTEIELLLEIKEEELNSIIVEMRRNCTSLQEKLVKEESEKTAAMDSLVTEREARLNFERSQNTLQEDLGRAQRELQSANQKISSLNDMYKRLQDYITSLQQYNGKLHSELSSVENELKRVEKEKGTVVENLTMLRGQLTLSMSSQEEATKQKDALASEVTSLRVELQQVRDDRDCQLSQVQTLSSELEKFKDSTEKSCSELNNLTIRTNELEAKCALQDERIKVLQEQLTTAEEKLQVSDISASETRTEYEGQQKLVLELQRRLADAEYKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCSTEGKVISYPTSMEASGRGVELTQSGQKHSFTFDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNKSSSDATPTRMENGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDHASAGESLCSLRFASRVNACEIGTPRRHTNGRPIESRLTYF 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1032 763 Coils Coil 41 61 - -
Ssu8g1032 763 CDD KISc_C_terminal 398 744 - -
Ssu8g1032 763 Coils Coil 359 379 - -
Ssu8g1032 763 ProSiteProfiles Kinesin motor domain profile. 400 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 Coils Coil 96 148 - -
Ssu8g1032 763 Coils Coil 317 344 - -
Ssu8g1032 763 Pfam Kinesin motor domain 406 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 762 - -
Ssu8g1032 763 Coils Coil 254 281 - -
Ssu8g1032 763 PRINTS Kinesin heavy chain signature 643 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 PRINTS Kinesin heavy chain signature 612 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 PRINTS Kinesin heavy chain signature 692 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 PRINTS Kinesin heavy chain signature 476 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 SUPERFAMILY Tropomyosin 239 398 - -
Ssu8g1032 763 SMART kinesin_4 398 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu8g1032 763 Coils Coil 170 204 - -
Ssu8g1032 763 PANTHER KINESIN-LIKE PROTEIN 7 762 - -
Ssu8g1032 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 740 IPR027417 -
Ssu8g1032 763 Coils Coil 212 239 - -
Ssu8g1032 763 Gene3D Kinesin motor domain 344 744 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1032 Ssu-Chr8 17701330 17707719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1032 69 754 Calmodulin-binding Proteins AT5G65930 31.647 2.07e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1032 K10405 - gmx:100814696 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1032 8 17701330 17707719 Ssu8g1032 8 17701330 17707719 ECH
Ssu8g1032 8 17701330 17707719 Ssu3g1980 3 64948440 64954911 PCT