Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1005 ATGCAGTCTACGGTGTCTTATACAGTGCAGCATGTTTCGGAGCACCGTCTTCCCGTAGAGAAGTCCTTGAGACCTCAGGGTTTCCATTCATTGTACACATTTCGATTCAAACTCAATTGTTCGAATGAAGAGGATGTTATCAAGAATCGCGAGAAGAAGAAGGCTTATGCCGCGTCGCTAAAGGACGAGGTTGTGAAGTTGAAGGCTCTGACCCAGCACTTAATGAAGAAGTTGCAGGGGCAGGCTTCATTGGAGGCTAAAATTGCAAGGCTAAAGTGCTTACTAGTGGACATAAGAGGGAGGATTGAAGGGAAAATTAGGTCGTTTCCGTATCAAAAATTGCCAAATGTGAACACCCTTATGCCTAACCTACCTGCCATATTGACCATAAGAAGCAAATCCAAATGA 408 0.4436 MQSTVSYTVQHVSEHRLPVEKSLRPQGFHSLYTFRFKLNCSNEEDVIKNREKKKAYAASLKDEVVKLKALTQHLMKKLQGQASLEAKIARLKCLLVDIRGRIEGKIRSFPYQKLPNVNTLMPNLPAILTIRSKSK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1005 135 PANTHER CCAAT/ENHANCER BINDING PROTEIN 37 118 - -
Ssu8g1005 135 PANTHER BASIC LEUCINE ZIPPER 23 37 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1005 Ssu-Chr8 17064787 17070076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1005 41 113 bZIP Transcription Factor Family AT2G16770 68.493 4.84e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1005 K25785 - gmx:780549 122.479