Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0992 ATGGATGGATGTACAAGTTTATCCTTGGTTCATGAATCTATTGGAGCTCTTGCAAAACTAACATTCTGGAGTTTGAGAGACTGCAAAATTCTTGTTAGCATACCTGACAACATTAATACCATGATATCTCTTCAAACTCTAGACTTTTGTGGTTGTTTGGAACTTACGTATTTGCCTATAGGGGAAGGTTTCAATTCTTCATCCAATTTGGAATCTTTGATTTTTCTGGAGATAGGCTTTTGCAATCTACTTGAAGTACCTGATGCTATTGGACAGTTAAGTTGTTTGGAAAGATTGAATCTACAGGGAAATGATTTTGTTTCATTACCTAATTCCATCAAGGGACTACACTGTCTAGCATATTTAAACTTGTCTCATTGCCATAAGCTTAAAACTTTGCCTAACCTTCCATCAGAAAGGGCTTCATCGGGGGGAAGGTATTTTAAAACAGTATCCGGATCTCATGATCATAGGTCAgggttttatgtttttggttgTCCCAAGTTGGTAGATAAGTTTTCCATAGATTTGAATGGGGTGTCCGCACATTTCAATGAGGAGTTCTCGTGCAAAGGCATAGAACTTGCATGGTTAATAAGACTAATTAAGGAACCCTATCATTTTCGGTGTGGCTTTGACATTGTTGTTCCTTGGGGTTTGGAAGTTATTTTCTCACGGTGGTTCAATAACGAATTTGATGAGGGTTCAGTTATAAGGATAAAGCAATGTAATATGGATGACAACTGGATTGGCTTTGCTTTTTGTGTTATATTTGAGGTAGATAAATATTTCAgtgtttctttttcttcgtcACCGCCGTAtccattttatctttctttcgaAAGTGAAAACACAGAAGAATACTTTGATATGCCACTTAATTTGGAGCTGGACAAGATTGGTAGATCAAACCATCTTTGGATCATTTATATCTCTCGGCAACACTGTCATTTTCTGAAAACAGGGGCGCATATCACATTTAAAGCCCGTGAACGTTTTAAGATCAAGAAATGGGGGATGAGCAGTATATTCAAGCAAGATATAGATTACTTACAAAGGATGCAACTAGGAGAACCACTTCCGCCCCATCCAAATTTGGATCATAGTGATGTACACTATATTGACTTTGATTTTGTAGAAAAAAGCAACAGCAGCTCTGGATCTAAATTCCAGCTTCCTTACAATTGGTTGGTCACAAAGGAAGACAAGGATGAGAATAAGGAAGCAAAggtgaaagaaaataatctttCCAATGTGGGGCTTGAAAGGCCACGTTTATCACCAAGGGTGGAGATCAGCTCAATTCGGATGGATGATGTCTTTCGATGGAGAAAGAATGGACAAAAATGA 1350 0.36 MDGCTSLSLVHESIGALAKLTFWSLRDCKILVSIPDNINTMISLQTLDFCGCLELTYLPIGEGFNSSSNLESLIFLEIGFCNLLEVPDAIGQLSCLERLNLQGNDFVSLPNSIKGLHCLAYLNLSHCHKLKTLPNLPSERASSGGRYFKTVSGSHDHRSGFYVFGCPKLVDKFSIDLNGVSAHFNEEFSCKGIELAWLIRLIKEPYHFRCGFDIVVPWGLEVIFSRWFNNEFDEGSVIRIKQCNMDDNWIGFAFCVIFEVDKYFSVSFSSSPPYPFYLSFESENTEEYFDMPLNLELDKIGRSNHLWIIYISRQHCHFLKTGAHITFKARERFKIKKWGMSSIFKQDIDYLQRMQLGEPLPPHPNLDHSDVHYIDFDFVEKSNSSSGSKFQLPYNWLVTKEDKDENKEAKVKENNLSNVGLERPRLSPRVEISSIRMDDVFRWRKNGQK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0992 449 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 2 135 - -
Ssu8g0992 449 Gene3D Ribonuclease Inhibitor 3 171 IPR032675 -
Ssu8g0992 449 SUPERFAMILY L domain-like 6 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0992 Ssu-Chr8 16834216 16838171 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0992 1 135 WRKY Transcription Factor Family AT4G12020 34.559 2.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0992 - - pvu:PHAVU_005G093400g 448.743