Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0977 ATGGACTCCATCGCCGGAGCTCCGCTGCAAGCTGGCGCCCCTCCGTCGCCGCGGCCGTCGACGTTCCCCGGCCGGGAAGACTGCTGGTCCGAGGAGGCGACGTTCACGCTCATCGACACGTGGGGCGAGCGCCACCTCGACCTCAACCGCGGCAACCTCCGCCAGAGGCACTGGCAGGAGGTCGCCGACGCCGTCAACGCTCGCCACGGCCACGGCGGGACCGGGGCGGCGCGCCGCACCGACGTGCAGTGCAAGAACCGCATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCAGCGACTCCGCCACCTCGTGGCCGTTCTTCCGCCGCCTTGATTTCCTCATCGGCGACACTTTTCCGGCGAAGAGGCCTTCCCCGCCGGCGACCTCCCGGTGCACTCCTCCGGCGAAGTCCCCGGCGTGGTCGCTCGTTCCCGTCGGCCCTCGATCCGGCCCGCAGAAACGGCCGGCGGCGAAGGAGGCGTCGCCGGAGAGCATGGCGGACTCGTGCTTCCGGCGGAATTTCTCAGTGTttgcggcggcggcggcggcggcggcggacAGCGAGAATAATTCGAATGGTGAGAAATGGAGCAGTGAGAGTGAGAAGGgaatgatgaagaagaaaagaggaagGGATTGGGAATTAGGGTACAGAGAGGTGGCAGAGGCGTTAGAGAGGTTTGGGGAGATTtatgagagagttgaagaagcGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAGTTTGCTAAGGATTTGGAAACACAGAGAATGAAGCTCTTCATGGAAACGCAGGTTCAGTTGCATAAAATCAATCGCTCCAAGAGTTCTTCTGCACCTGACAGTGTCTCATAA 888 0.5642 MDSIAGAPLQAGAPPSPRPSTFPGREDCWSEEATFTLIDTWGERHLDLNRGNLRQRHWQEVADAVNARHGHGGTGAARRTDVQCKNRIDTLKKKYKIEKARVSDSSDSATSWPFFRRLDFLIGDTFPAKRPSPPATSRCTPPAKSPAWSLVPVGPRSGPQKRPAAKEASPESMADSCFRRNFSVFAAAAAAAADSENNSNGEKWSSESEKGMMKKKRGRDWELGYREVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQVQLHKINRSKSSSAPDSVS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0977 295 Coils Coil 228 259 - -
Ssu8g0977 295 Gene3D - 29 97 - -
Ssu8g0977 295 MobiDBLite consensus disorder prediction 1 26 - -
Ssu8g0977 295 MobiDBLite consensus disorder prediction 195 218 - -
Ssu8g0977 295 MobiDBLite consensus disorder prediction 129 172 - -
Ssu8g0977 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 292 IPR044823 -
Ssu8g0977 295 Pfam Myb/SANT-like DNA-binding domain 26 120 IPR044822 -
Ssu8g0977 295 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 13 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0977 Ssu-Chr8 16571416 16575023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0977 214 282 Trihelix Transcription Factor Family AT3G14180 46.377 4.31e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ssu8g0977 Myb_DNA-bind_4 4.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0977 - - gmx:100784918 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0977 8 16571416 16575023 Ssu8g0977 8 16571416 16575023 ECH