Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0974 ATGGCTTCGTCCAAGGATCGCGAGAACTTCGTCTACGTCGCCAAACTCGCCGAACAGGCCGAGCGATACGAAGAGATGGTGGATTCAATGAAGAAGGTTGCGAATCTCGACATTGAACTGACGGTGGAGGAGCGGAATTTGCTTTCTGTTGGGTACAAGAATGTGATTGGTGCCCGCAGAGCGTCGTGGAGGATCCTGTCTTCCATAGAGCAAAAGGAGGAAACAAAAGGGAATGAATTGAATGCGAAGCGGATTAAGGAGTATAGGCAGAAGGTTGAATCAGAGCTTTCGAACATCTGTAATGATGTTATGAGAGTGATTGATGAACACCTTATACCTTCTGCTACTGCTGGTGAATCCACTGTGTTTTACTATAAGATGAAAGGAGATTATTATCGTTATCTTGCTGAATTTAAGACAGGCAATGAGAAGAAGGAAGCTGCTGATCAGTCTATGAAAGCATATGAGTCTGCTACCACTGCAGCAGAGGCTGAATTAGCTCCCACACATCCCATCCGATTGGGTCTGGCTTTAAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCCCCAGAAAGAGCCTGTCATCTTGCGAAGCAAGCTTTTGATGAAGCTATTTCTGAGCTTGACACTTTGAATGAGGAGTCATACAAAGATAGCACCTTAATCATGCAACTTCTCAGGGACAACCTGACTTTGTGGACTTCTGACATCCCAGAAGATGGAGAAGATGTCCAGAAAGTGAATGGCACTGCCAAGCTTGGTGGTGAGGATGCAGAGTGA 783 0.4483 MASSKDRENFVYVAKLAEQAERYEEMVDSMKKVANLDIELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVESELSNICNDVMRVIDEHLIPSATAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAADQSMKAYESATTAAEAELAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDVQKVNGTAKLGGEDAE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0974 260 Coils Coil 13 33 - -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Ssu8g0974 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Ssu8g0974 260 PANTHER 14-3-3 PROTEIN 3 247 IPR000308 -
Ssu8g0974 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Ssu8g0974 260 Coils Coil 195 215 - -
Ssu8g0974 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Ssu8g0974 260 Gene3D - 1 249 IPR036815 -
Ssu8g0974 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Ssu8g0974 260 PIRSF 14-3-3 1 247 IPR000308 -
Ssu8g0974 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Ssu8g0974 260 MobiDBLite consensus disorder prediction 241 260 - -
Ssu8g0974 260 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 3 247 - -
Ssu8g0974 260 SMART 1433_4 7 248 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0974 Ssu-Chr8 16467347 16470374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0974 1 260 14-3-3 family AT2G42590 80.608 2.20e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0974 K06630 - gmx:547990 485.337