Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0945 atgCCTGTTAAAGGAGGTTTGCAACCATCTCGCAGGAGGTCCCTTTTTACCTTGGATCCATACGTGCTTATCTTCTCTGCCAGGGTTGGCAATGTCCCTAATCTAATCCCAAAAGTTAAAGCATCACTGACAGAGGCAAcattcattctttttatttcttcaagGAAAAATTTGGTGTCAAATTTATCCAGGTATAACGAGGATGAGCTCACAGCGGTTGTGTACCTTCAAGTGAGTATTGTAAGTCAGGCTCTCATCTTTGTTACGCGGTCAAGGATCTGGTCTTTTGTTGAGCGCCCTGGTCTCTTGCTTGTTACAGCCCGTATAATAGCACAATTGGGCTTTGCAAGAATGAAAGGAATTGGATGGGTCTGGGCTGGTGTCATTTGGCTCTATTCAATTCAGCAGCATTACACTGTTTGA 423 0.4184 MPVKGGLQPSRRRSLFTLDPYVLIFSARVGNVPNLIPKVKASLTEATFILFISSRKNLVSNLSRYNEDELTAVVYLQVSIVSQALIFVTRSRIWSFVERPGLLLVTARIIAQLGFARMKGIGWVWAGVIWLYSIQQHYTV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0945 140 Gene3D - 12 138 - -
Ssu8g0945 140 PANTHER PLASMA MEMBRANE ATPASE 2-LIKE 63 135 - -
Ssu8g0945 140 PANTHER CALCIUM-TRANSPORTING ATPASE 63 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0945 Ssu-Chr8 16102706 16103664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0945 64 138 Primary Pumps ATPases AT2G18960 62.791 2.59e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0945 K01535 - tcc:18595399 115.546