Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0913 ATGTCTGCTCGTACTTTGTTTTTCCTCATCCTTAACTTAACTCTTCTTCAAGTTCTGAGTTCAGCGTCAGCAACTGAATTTGTCTACAACAGAAACTTCAACTCGTCTAACATAAAACTCTATGGTAATGCCACCATCCAAAACTCAATTCTCACGCTTACAAACCAGACTTTCTTCTCCATAGGGCGTGCTTTTTACCCTCAAAGAATAGCCATGAAGCCACCAAACTCTTCCATGGTTCTTCCCTTTGCAACCTCTTTCATCTTCTCCGTTGCCCCTTGCGAGAACTTCCCCGTTGCTCATGGTTTTGCGTTCATTTTCTCGCCCGTGATGGCCATAAATGGAGCACTCTCGGGGAACTACTTGGGCCTCTTTAACCGCTCCACTTCAGGTAACTCTTCCAACCATGTTTTAGcggttgaatttgatgattttagGAACGAGGAGTTCAATGAGGAGAACGATAATCATGTGGGTGTGGACTTGAATTCGATGATTTCGACGTATTCGAAGCCTGCTGCGTTCTGGGGTGGGAGAGAGGGTGAGGAATTGGAGAATTTGAAGCTGGCTGATGGTAGAAACTATCAGGTTTGGATTGAGTTTGAGGATTCAATGATTAATGTTACTATCGCCCCAGCAGGGAAAACGAAGCCTCATAGGCCTTTGATTAGTAAGCCTATTGACCTTTCTTGGGTCTTGGAGGGTGAAATGTATGTGGGGTTTTCTGGGGCAACAGGTAGAATGGTGGACATTTGTAGAATCTTGGCTTGGAGTTTTAGCaattctaatttttcaattggTGATGCTTTGAGTACCAAGCATTTGCCCTTGTATGTGCATCCAAAGACATTGCTGTTTAGATCAAGGGGTTTCATTATAGGTGTAACTTTTGGTGCGTTTTTTGTGGGTGGCTTCTGTGCTTTGGTGGTTTTTTTCAGTTTGTTCAGAAGCGGAaaggaagaggaaaaagaaaattttgagaactgGGAATTGGAGTATTGGCCACATAGGATTAGCTATCAGGAGATTTGTGATGCAACAAGTGGGTTCTCTCAAGAGAAAGTGATTGGGATTGGAACAAGTGGGAAAGTATACAAGGGAGTTTTGAAGGGAGTGGAAGTTGCGGTGAAGAGCATCAATCACGACACACAGCGCGGAATGAGGGAGTTTCTGGCAGAGATTTCAAGCCTAGGCAGAATGAAACACAGGAATTTAGTGGGTTTCAGAGGTTGGAGCAAAAGAAAGGGAGGAAAACTGATACTGGTTTATGATTACATGGTGAATGAGAGCTTGGACAAGAGGATCTTTGAGTGTGAAGAGACCATGCTGCTGAGCTGGGAAGGAAGAATTAGAGTTTTGCAAAACGTAGCTGATGGAATTTTATACCTACATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATCAAATCTAGTAATGTACTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGCTGCATCACCAGGAACATGTGGCTGACACAACAAGAGTGATAGGGACTCTGGGGTACATGGCACCTGAACTAGTACGAATTGGGCGACCGTCTTCTGCATGTGATGTGTATAGTTTTGGAGTATTGGTTTTAGAAGTGGTGTGTGGGAGAAGACCCATCATAGCTGATCAGCCACCATTGGTTGATTGGGTGTTTTCCCTTATGGAGAAAGGGGAATTGAGTTGTGCTATTGATGAGCGTTTGAAGGGTCAAAGTGGGTATAATGCTGAGGAAGCTGAGAGGCTGCTTCATTTGGGTTTGTTATGTGTGAGTACAGACCCTGGTGTTAGGCCAACAATGAGGCAGGTGGTGAAAGCATTGGAGGGAATAGAATGCACGGAGTGTAATGAAGAGTGCATCCATTTGGGCCTGCTTGGAAAAATAAACTCGGCAGCATCATGGTCTAAGAGTTCTACAAGTTCTGCCAATGTAAATTATCCTACCTTTGATGAAATTTTGCAGACAAAGTTTTATTCTACAGCATCTTTAAGCGTCTCTTGTCCCAGCCCACAGCTAGAGTCAGAGTTTGTCTCGGAAGGAAGGTGA 2079 0.4295 MSARTLFFLILNLTLLQVLSSASATEFVYNRNFNSSNIKLYGNATIQNSILTLTNQTFFSIGRAFYPQRIAMKPPNSSMVLPFATSFIFSVAPCENFPVAHGFAFIFSPVMAINGALSGNYLGLFNRSTSGNSSNHVLAVEFDDFRNEEFNEENDNHVGVDLNSMISTYSKPAAFWGGREGEELENLKLADGRNYQVWIEFEDSMINVTIAPAGKTKPHRPLISKPIDLSWVLEGEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALSTKHLPLYVHPKTLLFRSRGFIIGVTFGAFFVGGFCALVVFFSLFRSGKEEEKENFENWELEYWPHRISYQEICDATSGFSQEKVIGIGTSGKVYKGVLKGVEVAVKSINHDTQRGMREFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKRIFECEETMLLSWEGRIRVLQNVADGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARLHHQEHVADTTRVIGTLGYMAPELVRIGRPSSACDVYSFGVLVLEVVCGRRPIIADQPPLVDWVFSLMEKGELSCAIDERLKGQSGYNAEEAERLLHLGLLCVSTDPGVRPTMRQVVKALEGIECTECNEECIHLGLLGKINSAASWSKSSTSSANVNYPTFDEILQTKFYSTASLSVSCPSPQLESEFVSEGR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0913 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 270 IPR013320 -
Ssu8g0913 692 Gene3D - 23 272 - -
Ssu8g0913 692 ProSiteProfiles Protein kinase domain profile. 350 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0913 692 ProSitePatterns Protein kinases ATP-binding region signature. 356 377 IPR017441 GO:0005524
Ssu8g0913 692 PANTHER - 8 675 - -
Ssu8g0913 692 CDD lectin_legume_LecRK_Arcelin_ConA 25 262 IPR001220 GO:0030246
Ssu8g0913 692 PANTHER LECTIN RECEPTOR KINASE 8 675 - -
Ssu8g0913 692 Pfam Protein kinase domain 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0913 692 Gene3D Phosphorylase Kinase; domain 1 313 425 - -
Ssu8g0913 692 Pfam Legume lectin domain 25 263 IPR001220 GO:0030246
Ssu8g0913 692 Gene3D Transferase(Phosphotransferase) domain 1 426 632 - -
Ssu8g0913 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Ssu8g0913 692 SMART serkin_6 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0913 692 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0913 Ssu-Chr8 15460430 15462508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0913 23 572 Receptor kinase-like Gene Family AT4G04960 53.957 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu8g0913 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0913 - - gmx:100804025 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0913 8 15460430 15462508 Ssu8g0913 8 15460430 15462508 ECH