Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0912 ATGAATGACTTGCGTGGGCCGGCACCAACCGTTACCTTTACTCTTGGAGGGTTAACAAGATCTGAAAATTTCATACATATGCAGCAACCAGTTTCAACTTGGCAAAGTTTCTCTTCTATTCTCAGTCCCTTGCCAATGTCTCCACTAAAGCTCCTTGTCATTCTTCTTCACACTGTAACCACTTTGAGTTCAGTTTCCGCTACTGAATTTGTCTATAACACAAACTTCAACTCCACAAATATCAACCTATATGGGAATGCCTCTATTGAGACCTCGATTCTGACTCTCACAAATCAAAGTTTTTTCTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAACTAGCCAAATCTTCCACCTTTCTCCCCTTTGCAACCTCCTTCATTTTCTCAATTGCCCCCATCAAAAACTTCATCACTGGTCATGGCTTTGTCTTCCTATTCACACCATCAAGAGGTGTGAATGGCACGACCTCGGCTGAGTATATCGGTCTTTTCAATCTCAGCAATGAAGGCAATCCTCAGAACCACGTTTTTGGAGTTGAGTTTGATGCAGTTAGAAATGAAGAAGAATTCAACGATATAAGTGACAATCATGTTGGTGTTGACATAAACTCGCTTCGGTCCTCAACTTCGCATGAGGCTGGCTACTGGGGTGGGAAAGATGAGAAAGAATTTAAGGTGTTGGAgataaaaaatggagaaaactATCAGGTATGGATTGAGTTTATGCATTCCCAGCTTAATGTTACTATGGCTCGGGCAGGACAAAAGAAGCCTAGAGTGCCTCTTATCAGTAGTAATGTTAACCTTTCAGGGGTTCTTCTGGATGAAACATATGTTGGATTCTGTGCATCAACAGGAAGGATAATAGACAGTACTAGGATTCTTGCTTGGAGTTttagcaattcaaatttttcaATTGGTGATGCTTTAGTGACAGAAAATTTGCCTGTATTTGTTCATCATAAAAGGTGGTTTTCTGGTGCACGAGCTTTAGCTGTAGGTGTTACCAGTATTGTCTGTGTGTCAATCATTGGTTATGGTTATGTAGCGTTTTTCGTTCTCCGCAGAGGCAAGGCTGGAGAGGAGGTTGAAGACTGGGAACTGGAGTACTGGCCCCATAGGATTAGTTTCGATGCGATTGATGCAGCAACAAGGGGGTTCTCTGAAGAGAATGTGGTTGCGGTAGGAGGGAATGGGAAGGTATATAAAGGGGTTTTGCATGGAGTAGAAGTCGCAGTGAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCCTAGGCAGAATGAAGCACAGGAATTTAGTAGGATTGAGAGGCTGGTGCAAAAAagaaaggtgtaatttgattctAGTTTATGACTTCATGAGCAATGGAAGTTTAGACAAAAGGATATTTGAGTGTGAAGAGAGAATGATGCTGACATGGGAAGAGAGGATTCAGGTTTTGAAAAATGTAGCCACAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATCAAAGCGAACAATGTTCTTCTTGATAAGGACATGAATGCTAGGCTGGGAGATTTTGGATTGGCTCGTATGCATGATCATCATGGACAAGTAGCCAGCACAACAAGAGTCATAGGGACAGTAGGATACATTGCTCCTGAAGTGATTCGAACAGGAACGGCATCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGTTGGAAGTAATTTGCGGGCGGAGACCTATTGAAGTACATAAACCGGGGCTAATTGAATGGTTGATTGCCCTATTGGTGCAAGGCCAATTGCACAGTGCTGTTGATGGAAGGTTGAAGGCTAAAGGGGGATACACCGTAGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAACAATGAGGCAAGTTGTGAAAATGTTGGAGGGGGAAGTGGACAGCATTGAGTCTGATGAAGAAAACATGGAGATGAGTTtgcttggaaaaataaaatcagcTGCATCCTGGTCTAGAACTGAATGTACTTTTCCACACAATGGTTACCCTACTTTTGATGAAATTAAGATGTTCAGTTTTAATTCTAGGACGTCTGGAAGTGGCTCAAGTACCTTTCCAGGATCAGAGTCAGAAGTCATCAGAGAAAACAGATAA 2208 0.4126 MNDLRGPAPTVTFTLGGLTRSENFIHMQQPVSTWQSFSSILSPLPMSPLKLLVILLHTVTTLSSVSATEFVYNTNFNSTNINLYGNASIETSILTLTNQSFFSIGRAFYPHKIPTKLAKSSTFLPFATSFIFSIAPIKNFITGHGFVFLFTPSRGVNGTTSAEYIGLFNLSNEGNPQNHVFGVEFDAVRNEEEFNDISDNHVGVDINSLRSSTSHEAGYWGGKDEKEFKVLEIKNGENYQVWIEFMHSQLNVTMARAGQKKPRVPLISSNVNLSGVLLDETYVGFCASTGRIIDSTRILAWSFSNSNFSIGDALVTENLPVFVHHKRWFSGARALAVGVTSIVCVSIIGYGYVAFFVLRRGKAGEEVEDWELEYWPHRISFDAIDAATRGFSEENVVAVGGNGKVYKGVLHGVEVAVKRIPQEREEGMREFLAEVSSLGRMKHRNLVGLRGWCKKERCNLILVYDFMSNGSLDKRIFECEERMMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKANNVLLDKDMNARLGDFGLARMHDHHGQVASTTRVIGTVGYIAPEVIRTGTASTMSDVFGFGILVLEVICGRRPIEVHKPGLIEWLIALLVQGQLHSAVDGRLKAKGGYTVEEAERLLHLGLLCSNSDPSVRPTMRQVVKMLEGEVDSIESDEENMEMSLLGKIKSAASWSRTECTFPHNGYPTFDEIKMFSFNSRTSGSGSSTFPGSESEVIRENR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0912 735 ProSiteProfiles Protein kinase domain profile. 391 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0912 735 SMART serkin_6 391 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0912 735 PANTHER LECTIN RECEPTOR KINASE 46 722 - -
Ssu8g0912 735 SUPERFAMILY Protein kinase-like (PK-like) 369 661 IPR011009 -
Ssu8g0912 735 CDD lectin_legume_LecRK_Arcelin_ConA 68 306 IPR001220 GO:0030246
Ssu8g0912 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Ssu8g0912 735 Pfam Protein kinase domain 395 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0912 735 Pfam Legume lectin domain 68 307 IPR001220 GO:0030246
Ssu8g0912 735 Gene3D Transferase(Phosphotransferase) domain 1 467 684 - -
Ssu8g0912 735 SUPERFAMILY Concanavalin A-like lectins/glucanases 68 306 IPR013320 -
Ssu8g0912 735 CDD STKc_IRAK 400 662 - -
Ssu8g0912 735 MobiDBLite consensus disorder prediction 714 735 - -
Ssu8g0912 735 Gene3D - 66 311 - -
Ssu8g0912 735 PANTHER - 46 722 - -
Ssu8g0912 735 MobiDBLite consensus disorder prediction 714 729 - -
Ssu8g0912 735 Gene3D Phosphorylase Kinase; domain 1 357 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0912 Ssu-Chr8 15457308 15459515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0912 65 608 Receptor kinase-like Gene Family AT4G04960 56.600 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu8g0912 Pkinase 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0912 - - gmx:100804553 1237.25