Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0887 ATGCTCATGGTTTGGAATGATTTGGGTCTCGATTTGGTGTTATGTGTGTGCAATTTAGTGGGGGACAATATGGCAGATGGAGAAAGAATGAGATGGAGGGAGGAGAGAAGGGAACAGGAGAAAGAAGAAGGTCGTGTTGTGTACGCTTTCCCTGCTGCCTGCAAGAGGAAATATAACTGGAGCGTGAAGGCCATTCGGAGAAAGACCACTAGGATTGGAAGGATGAGGTACTTGCGTCACGTGCCTCACAGATGTAAGAGCAGCTTCAGAGAGGGTACAGAAGCTACACCCCGGAAGAGGGAAGACGTTGCCACTGCCTAA 321 0.4922 MLMVWNDLGLDLVLCVCNLVGDNMADGERMRWREERREQEKEEGRVVYAFPAACKRKYNWSVKAIRRKTTRIGRMRYLRHVPHRCKSSFREGTEATPRKREDVATA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0887 106 Gene3D - 29 98 IPR011331 GO:0003735|GO:0005840|GO:0006412
Ssu8g0887 106 PANTHER 60S RIBOSOMAL PROTEIN L37 47 102 - -
Ssu8g0887 106 PANTHER 60S RIBOSOMAL PROTEIN L37-1-RELATED 47 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0887 Ssu-Chr8 15069993 15071726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0887 49 106 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 67.241 6.95e-22 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0887 K02922 - mnt:21408863 93.2041