Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0862 ATGACTCGGGCGGCGCAGGTGGCCTTCTCCGCTGTGTCGAAGGCTCACTTCCCTCAACCACTCTTCCCCTCACTTTCTTCGACATTCCATGGTTTTGTTGCCTCGTCCCCGTGCAATGCATCTTCTTCTATCGCTCTCCCCACCCCACCCACCACTTCCTCCAAAGTCCAAACAGCACTTCCCATTTTGAAATACTCTCTTTCCCTCACTCTCCAACACTTCTTCCTCTTCGCCGCCAACCTCATCGTTCCACCACAACCACGCCTCTCTCACTTCCGCTACCTCGACGACAACTCTCTCTCCTTCACCGTTGCGGAGTCCACCACAGACTTCACCCTCCTCACATCTGATTCACCGCAAGACGTTCGAAACTGGCACCCTCTTATTCCCACGTTGTCTCCCCCACGTGTCGAGCAACACGGCACACGTGTGAACCCTCTCGTGGTCATTCAGGTCACGGTTCTACCAAACTCCGGATTCAGCATATGTCTCACGTTTAACCACCTCGTTGGGGATGGCAGATCGCTTCATCATTTCATGAAGTTTTGGGCCTCTCTTTGCAAGGCGAGAGGGGACATGGCTTCCCTTGGAACCCCTTTGTCCCTTCCTTCACACGAGAGGGATAGAGTTAAGGACCCAAAGGGGCTTAAACTCGTTTACTTACAAGAACTTGAAAATCATGAGTCGCAAAGCATGGAGCTTACAACCATCATGCCGGATGTTTTCACTGACGAGGTTCGCTCTACCCTTGTATTGAGTCGTGAACAAGTTGAGAAACTGAAGAAATGGGTCTCTCTTAAATGTGTTAGCAACGATTCGGGGCTATTGCACATATCAACCTTTGAGGTGACTTGCTCCTTGATTTGGGTTTGTATGATTAGATCAGAGGAGAGCAGAGTCAATCGTGTTGCACAAGACTCATGTGATGAACTGTGCTACTTGGTGTTTCTAGCGGATTGTCGAGATAGTCCTGAAATTTCATTGCCTTCAACGTACTTTGGGAATTGTTTGGCCTCTTGTATTGTGTCAATCAAGAGGCATGAGCTAGTGGGAGAAAATGGGATCGTTGAGGTAGCAAAAGTTATTTAA 1089 0.4913 MTRAAQVAFSAVSKAHFPQPLFPSLSSTFHGFVASSPCNASSSIALPTPPTTSSKVQTALPILKYSLSLTLQHFFLFAANLIVPPQPRLSHFRYLDDNSLSFTVAESTTDFTLLTSDSPQDVRNWHPLIPTLSPPRVEQHGTRVNPLVVIQVTVLPNSGFSICLTFNHLVGDGRSLHHFMKFWASLCKARGDMASLGTPLSLPSHERDRVKDPKGLKLVYLQELENHESQSMELTTIMPDVFTDEVRSTLVLSREQVEKLKKWVSLKCVSNDSGLLHISTFEVTCSLIWVCMIRSEESRVNRVAQDSCDELCYLVFLADCRDSPEISLPSTYFGNCLASCIVSIKRHELVGENGIVEVAKVI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0862 362 PANTHER - 50 362 - -
Ssu8g0862 362 Gene3D - 242 362 IPR023213 -
Ssu8g0862 362 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 50 362 - -
Ssu8g0862 362 Gene3D - 32 237 IPR023213 -
Ssu8g0862 362 Pfam Transferase family 53 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0862 Ssu-Chr8 14614154 14617265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0862 82 337 Monolignol Biosynthesis Gene Families AT5G48930 24.719 9.33e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0862 - - gmx:100797294 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0862 8 14614154 14617265 Ssu8g0862 8 14614154 14617265 ECH