Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0855 ATGCAGTACAGGTATGTCATCATCAATCATCTCCGGAATACGTTTCCTTCAGAATTCTCAAATCTCATCAAACAAATGGCAGTGCCTAGAGCACACAAGCTTGTTGAGAAATTTCATGTTGCTCCAGCATCACACCCTGATTGCAGAACAAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCAGGTCCTATTTATGTGAAACGCCAATTCTTCTATCACTTTCCCCATCCCGTGCACCATTTCTGTGAAACCAAACTCCCCACTCTCAAACACTCACTCTCTCTCACCCTTCAACACTTCTTTCCTCTTGCCGGAAATCTCCTCTGTCCGCCACCTCCCCACAGACCCTTCATTCGCAGAGCCCATGATGACACCGTTACCTTAACCATCGTCGAGTCCGAAGCTGATTTCAACCACCTCTCATCCAACCACCCCAAAAGTGGTGATACTGATGAGGATTTTGTTAAGGCAACGGCTGTTTTTGGGAAAGATGATATTGAGGGGTTAAAAAGATGGGCGCTGAACCAGTGGAAGAAAGACGACGAGCTTAACTCGCCGCAAAATCTGTCAAAATTTGTGGTTACGTGTGCTTTTGTGTGGGCTAGCTTGGTCAAAACAAGATGCAGAAATGATGATGAAATAAATGACAAAGAGGAGTATTTTCGTTTCGCTGCAGATTGCAGAGATCGACTTGAGTATGCTATACCAGAAACATACTTTGGAAACTGCTTAACACTATGTTATGCAATACTCAAGAGCAAGGACCTCAAGGGAGAAGGTGGCTTTTTGAGTGCGGTTAAGGTCATTGAACGGGCAGTGACTGATATGAAAAGTGAACCCTTTAAAGATGCAAAAAACTGGAGGGCATTGTTTATGAAGATGTTTGTGTTGGGAAGTACGTTGCTAGTTACAGGGTCACCCAAGTTCACTGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTGGAAATGGTACATCCATTCAAGTGTATGTCTCTAGCTGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGCTTGGTGTGTAGAAGtacagaatttgaaattttcatttctgCCATTGAACAAGGACTTGAAGCTTCAAAATCCTAA 1134 0.4312 MQYRYVIINHLRNTFPSEFSNLIKQMAVPRAHKLVEKFHVAPASHPDCRTRTTSSLPLSFLDLPLAGPIYVKRQFFYHFPHPVHHFCETKLPTLKHSLSLTLQHFFPLAGNLLCPPPPHRPFIRRAHDDTVTLTIVESEADFNHLSSNHPKSGDTDEDFVKATAVFGKDDIEGLKRWALNQWKKDDELNSPQNLSKFVVTCAFVWASLVKTRCRNDDEINDKEEYFRFAADCRDRLEYAIPETYFGNCLTLCYAILKSKDLKGEGGFLSAVKVIERAVTDMKSEPFKDAKNWRALFMKMFVLGSTLLVTGSPKFTVYETDFGFGRPTKVEMVHPFKCMSLAESGDEEGGLEVGLVCRSTEFEIFISAIEQGLEASKS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0855 377 PANTHER - 156 377 - -
Ssu8g0855 377 PANTHER - 26 152 - -
Ssu8g0855 377 Gene3D - 156 375 IPR023213 -
Ssu8g0855 377 Pfam Transferase family 143 365 - -
Ssu8g0855 377 Pfam Transferase family 49 113 - -
Ssu8g0855 377 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 156 377 - -
Ssu8g0855 377 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 26 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0855 Ssu-Chr8 14495301 14496794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0855 184 364 Monolignol Biosynthesis Gene Families AT5G48930 24.084 6.61e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0855 - - gmx:100811986 374.4