Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0841 ATGAGAAACCCATGGTTCTGCCTCTCTCTTCTCAccctctttttctctttgtccACCCATCCTTCCCTTGCAGCTCTCACTACCGTCTCCGCAAACCAAACTCTCACTGGGGACCACACCCTCGTCTCAGAAGGTGGCATCTTCGAACTGGGTTGCTTCAAGCCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCATACAAACAATTGTATGGGTAGCAAATAGAGACAACCCAGTCTCTGACAAGAACGCTGCCACGTTAACAATCTCGGGCGGTAATTTAGTTCTCTTAGACGGGTCTTCAAACCAAGTTTGGTCAACAAACATGACTTCTCCCAGGTCAGGTTCTGTCGTAGCTGTCCTCCTAGATTCTGGGAATCTCGTCTTAACGGATAGGCCTAACGACGCTTCTGCTTCAGACCCTCTGTGGCAGAGTTTTGATCACCCAACTAACACGTGGCTTCCGGGTGGCAAAATTAAACTCGACAACAAAACAAAGCAACCTCAGTACCTCACTTCATGGAAGAATAACGAAGATCCTGCGACGGGTCTCTTCTCTCTGGAACTAGACCCCAAAGGAACCACCTCTTATTTGATTCTTTGGAACAAGTCTGAACAGTACTGGAGTAGTGGTCCTTGGAATGGACACATCTTCAGCTTGGTTCCAGAGATGAGGGCGAATTATATCTACAATTTCACGTTTGTGTCGAACGAGAACGAGAGCTATTTCACCTACTCCATGTATAACTCTTCCATTATATCTCGGTTCGTGATGGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGGGGTGTATGCCTTTTGCGGCGCGTTTGGGAGCTGCACTGAAAACTCGATGCCGTATTGTAATTGTTTGACGGGTTTTGAGCCGAAGTCACCCTCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGAAAGGAAAACCAAGTTGCAATGCGAGAATTTCAATCCCTCTAAGGGGGGTAGGGATGGGTTTCTAGCAATTCCAAACATGGCGTTACCTAAACATGCTCAATCTGTGGGATCGCTGAGTGCAGGGGAATGTGAATCAACTTGTCTGAACAATTGCTCCTGCACAGCTTATGCGCATGACAGTAACTGGTGTTCGATTTGGATTGAGAACCTTCTGAATTTGCAACAGCTAACTTCTGATGATAGTAGTGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCACGATGATAAAAGCAACAACGGGACTTTTATCGGTGTGGTTGTGGGTGTGGTAGTTGGCATGGGGGTTCTCTTGGCGATTCTTTTGTTTTTCGTGATTCGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTTCGTTGGTGGCATTTGGGTATAGAGATTTGCAAAATGCAACGAAGAATTTCTCTGAGAAATTGGGAGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGGTGATTCCAGTGTGGTGGCAGTGAAGAAGTTAGACAGTATAAGCCAAGGAGAGAAGCAGTTTCGAACAGAAGTTAGCACAATAGGGACAGTACAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGAAGGTGCCAAAAAGTTGCTAGTTTATGATTACATGCCAAATGGTTCCTTGGATTTCCATTTGTTCCAGATCAAGAACTCTAAGGTGTTGGACTGGAAAATGAGATACCAAATTGCGTTGGGAACAGCAAGGGGATTAACTTACCTTCACGAGAAGTGTAGAGACTGTATCATACACTGTGATGTAAAGCCAGAAAACATTCTCCTAGATGCTGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGACTTCAGCAGGGTCCTCACAACCATGAGAGGAACAAGGGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATCACAGCCAAAGCTGATGTGTACAGCTATGGGATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCCATCAGAAGATGGCCAAGTTACATTTTTTCCTACCTTCGATGGCAAATGTTGTTGTCCAAGGTGGCAGTGTTCTTAG 2166 0.4557 MRNPWFCLSLLTLFFSLSTHPSLAALTTVSANQTLTGDHTLVSEGGIFELGCFKPGNSSNYYIGIWYKKVTIQTIVWVANRDNPVSDKNAATLTISGGNLVLLDGSSNQVWSTNMTSPRSGSVVAVLLDSGNLVLTDRPNDASASDPLWQSFDHPTNTWLPGGKIKLDNKTKQPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWSSGPWNGHIFSLVPEMRANYIYNFTFVSNENESYFTYSMYNSSIISRFVMDVSGQIKQLSWLENAQQWNLFWSQPRQQCGVYAFCGAFGSCTENSMPYCNCLTGFEPKSPSDWNLEDHSGGCERKTKLQCENFNPSKGGRDGFLAIPNMALPKHAQSVGSLSAGECESTCLNNCSCTAYAHDSNWCSIWIENLLNLQQLTSDDSSGETLYLKLAASEFHDDKSNNGTFIGVVVGVVVGMGVLLAILLFFVIRRRKRMVGAGKPVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLGDSSVVAVKKLDSISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFQIKNSKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQVTFFPTFDGKCCCPRWQCS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0841 721 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Ssu8g0841 721 Gene3D - 23 153 IPR036426 -
Ssu8g0841 721 SMART ntp_6 352 427 IPR003609 -
Ssu8g0841 721 Pfam D-mannose binding lectin 74 181 IPR001480 -
Ssu8g0841 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Ssu8g0841 721 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Ssu8g0841 721 SUPERFAMILY Protein kinase-like (PK-like) 480 707 IPR011009 -
Ssu8g0841 721 CDD B_lectin 32 155 IPR001480 -
Ssu8g0841 721 Gene3D Phosphorylase Kinase; domain 1 463 569 - -
Ssu8g0841 721 CDD PAN_AP_plant 340 428 - -
Ssu8g0841 721 Pfam PAN-like domain 352 409 IPR003609 -
Ssu8g0841 721 ProSiteProfiles Protein kinase domain profile. 495 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0841 721 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 712 - -
Ssu8g0841 721 Pfam Protein kinase domain 498 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0841 721 SMART serkin_6 495 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0841 721 PIRSF SRK 1 709 IPR024171 GO:0004674
Ssu8g0841 721 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Ssu8g0841 721 Gene3D Transferase(Phosphotransferase) domain 1 570 711 - -
Ssu8g0841 721 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 220 IPR036426 -
Ssu8g0841 721 SMART blect_4 32 155 IPR001480 -
Ssu8g0841 721 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Ssu8g0841 721 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 4 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0841 Ssu-Chr8 14158105 14160270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0841 451 694 Receptor kinase-like Gene Family AT5G20050 45.588 3.15e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu8g0841 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0841 - - gmx:100810583 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0841 8 14158105 14160270 Ssu3g2199 3 71510247 71512724 PCT