Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g0841 | ATGAGAAACCCATGGTTCTGCCTCTCTCTTCTCAccctctttttctctttgtccACCCATCCTTCCCTTGCAGCTCTCACTACCGTCTCCGCAAACCAAACTCTCACTGGGGACCACACCCTCGTCTCAGAAGGTGGCATCTTCGAACTGGGTTGCTTCAAGCCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCATACAAACAATTGTATGGGTAGCAAATAGAGACAACCCAGTCTCTGACAAGAACGCTGCCACGTTAACAATCTCGGGCGGTAATTTAGTTCTCTTAGACGGGTCTTCAAACCAAGTTTGGTCAACAAACATGACTTCTCCCAGGTCAGGTTCTGTCGTAGCTGTCCTCCTAGATTCTGGGAATCTCGTCTTAACGGATAGGCCTAACGACGCTTCTGCTTCAGACCCTCTGTGGCAGAGTTTTGATCACCCAACTAACACGTGGCTTCCGGGTGGCAAAATTAAACTCGACAACAAAACAAAGCAACCTCAGTACCTCACTTCATGGAAGAATAACGAAGATCCTGCGACGGGTCTCTTCTCTCTGGAACTAGACCCCAAAGGAACCACCTCTTATTTGATTCTTTGGAACAAGTCTGAACAGTACTGGAGTAGTGGTCCTTGGAATGGACACATCTTCAGCTTGGTTCCAGAGATGAGGGCGAATTATATCTACAATTTCACGTTTGTGTCGAACGAGAACGAGAGCTATTTCACCTACTCCATGTATAACTCTTCCATTATATCTCGGTTCGTGATGGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGGGGTGTATGCCTTTTGCGGCGCGTTTGGGAGCTGCACTGAAAACTCGATGCCGTATTGTAATTGTTTGACGGGTTTTGAGCCGAAGTCACCCTCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGAAAGGAAAACCAAGTTGCAATGCGAGAATTTCAATCCCTCTAAGGGGGGTAGGGATGGGTTTCTAGCAATTCCAAACATGGCGTTACCTAAACATGCTCAATCTGTGGGATCGCTGAGTGCAGGGGAATGTGAATCAACTTGTCTGAACAATTGCTCCTGCACAGCTTATGCGCATGACAGTAACTGGTGTTCGATTTGGATTGAGAACCTTCTGAATTTGCAACAGCTAACTTCTGATGATAGTAGTGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCACGATGATAAAAGCAACAACGGGACTTTTATCGGTGTGGTTGTGGGTGTGGTAGTTGGCATGGGGGTTCTCTTGGCGATTCTTTTGTTTTTCGTGATTCGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTTCGTTGGTGGCATTTGGGTATAGAGATTTGCAAAATGCAACGAAGAATTTCTCTGAGAAATTGGGAGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGGTGATTCCAGTGTGGTGGCAGTGAAGAAGTTAGACAGTATAAGCCAAGGAGAGAAGCAGTTTCGAACAGAAGTTAGCACAATAGGGACAGTACAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGAAGGTGCCAAAAAGTTGCTAGTTTATGATTACATGCCAAATGGTTCCTTGGATTTCCATTTGTTCCAGATCAAGAACTCTAAGGTGTTGGACTGGAAAATGAGATACCAAATTGCGTTGGGAACAGCAAGGGGATTAACTTACCTTCACGAGAAGTGTAGAGACTGTATCATACACTGTGATGTAAAGCCAGAAAACATTCTCCTAGATGCTGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGACTTCAGCAGGGTCCTCACAACCATGAGAGGAACAAGGGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATCACAGCCAAAGCTGATGTGTACAGCTATGGGATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCCATCAGAAGATGGCCAAGTTACATTTTTTCCTACCTTCGATGGCAAATGTTGTTGTCCAAGGTGGCAGTGTTCTTAG | 2166 | 0.4557 | MRNPWFCLSLLTLFFSLSTHPSLAALTTVSANQTLTGDHTLVSEGGIFELGCFKPGNSSNYYIGIWYKKVTIQTIVWVANRDNPVSDKNAATLTISGGNLVLLDGSSNQVWSTNMTSPRSGSVVAVLLDSGNLVLTDRPNDASASDPLWQSFDHPTNTWLPGGKIKLDNKTKQPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWSSGPWNGHIFSLVPEMRANYIYNFTFVSNENESYFTYSMYNSSIISRFVMDVSGQIKQLSWLENAQQWNLFWSQPRQQCGVYAFCGAFGSCTENSMPYCNCLTGFEPKSPSDWNLEDHSGGCERKTKLQCENFNPSKGGRDGFLAIPNMALPKHAQSVGSLSAGECESTCLNNCSCTAYAHDSNWCSIWIENLLNLQQLTSDDSSGETLYLKLAASEFHDDKSNNGTFIGVVVGVVVGMGVLLAILLFFVIRRRKRMVGAGKPVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLGDSSVVAVKKLDSISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFQIKNSKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQVTFFPTFDGKCCCPRWQCS | 721 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g0841 | 721 | ProSitePatterns | Protein kinases ATP-binding region signature. | 501 | 524 | IPR017441 | GO:0005524 | |
Ssu8g0841 | 721 | Gene3D | - | 23 | 153 | IPR036426 | - | |
Ssu8g0841 | 721 | SMART | ntp_6 | 352 | 427 | IPR003609 | - | |
Ssu8g0841 | 721 | Pfam | D-mannose binding lectin | 74 | 181 | IPR001480 | - | |
Ssu8g0841 | 721 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 615 | 627 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g0841 | 721 | ProSiteProfiles | PAN/Apple domain profile. | 344 | 428 | IPR003609 | - | |
Ssu8g0841 | 721 | SUPERFAMILY | Protein kinase-like (PK-like) | 480 | 707 | IPR011009 | - | |
Ssu8g0841 | 721 | CDD | B_lectin | 32 | 155 | IPR001480 | - | |
Ssu8g0841 | 721 | Gene3D | Phosphorylase Kinase; domain 1 | 463 | 569 | - | - | |
Ssu8g0841 | 721 | CDD | PAN_AP_plant | 340 | 428 | - | - | |
Ssu8g0841 | 721 | Pfam | PAN-like domain | 352 | 409 | IPR003609 | - | |
Ssu8g0841 | 721 | ProSiteProfiles | Protein kinase domain profile. | 495 | 721 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0841 | 721 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 4 | 712 | - | - | |
Ssu8g0841 | 721 | Pfam | Protein kinase domain | 498 | 696 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0841 | 721 | SMART | serkin_6 | 495 | 706 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0841 | 721 | PIRSF | SRK | 1 | 709 | IPR024171 | GO:0004674 | |
Ssu8g0841 | 721 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 148 | IPR001480 | - | |
Ssu8g0841 | 721 | Gene3D | Transferase(Phosphotransferase) domain 1 | 570 | 711 | - | - | |
Ssu8g0841 | 721 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 60 | 220 | IPR036426 | - | |
Ssu8g0841 | 721 | SMART | blect_4 | 32 | 155 | IPR001480 | - | |
Ssu8g0841 | 721 | Pfam | S-locus glycoprotein domain | 214 | 323 | IPR000858 | GO:0048544 | |
Ssu8g0841 | 721 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT | 4 | 712 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g0841 | Ssu-Chr8 | 14158105 | 14160270 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g0841 | 451 | 694 | Receptor kinase-like Gene Family | AT5G20050 | 45.588 | 3.15e-69 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Ssu8g0841 | Pkinase | 1.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g0841 | - | - | gmx:100810583 | 1191.02 |