Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g0838 | ATGAGAACTAACCAAGTTCTGTTCTCCCTTCTTTCTTGGGCGCTATGTTTCCAACTCTGTTCAGCTGGAGATACCTTGAACGCTGGCGAGACGATGTCTCAGGACTCAGGGGGGCACCTTGTTTCAGctaaactcaaatttgagttgGGCTTCTTTTCTTTACATGCTGAAAGTGGTAGCAGGATTGAAAAAAGATACTTTGGGATATGGTATTACAGGTTGAAACCACGAACAGTGGTATGGGTTGCCAATAGAAATGCGCCTATTTTAGATTCTACTGGAGTTTTTCAAATTGCAGACGATGGAAATCTGGTGGTAGAAGGTGCATCAAAAAGGTATTGGTCCTCTGAACTTAAAGGCTCCTCCTCGTCCACAAACAGAACAGTGAGGCTGCTGGATTCTGGGAACCTAGTCCTAGTGGACGATAACTCGGGAACGAGTTACTTGTGGCAGAGCTTCCAAAACCCAACAGACACGTTTCTTCCTGGCATGAAGATGGATGCAAGTTTAACATTGACTTCTTGGAGAGACGCAGGTGACCCGGAACCTGGGAACTTCACCTTTAAGATGGCTTACATAGCAGACGGTCAAAACTTCGTAATGCATAAGCAATCACAACTTTACTGGACACTTGAGGTTGTTGGACGCGAAGCAGAAGCGATTCCCCTAATAATACGTTACTTGTTGGACAACACCACATCGCACaagatttcaaacaaaataatcgTTTACTACAGTTACGAGAATTCAAGGCTACTATTGAATTCTAGCGGGGAGATACAATTGCTGAGGTGGAATGAGACAGACGAGGAATGGGTTAAGCTATGGTGGGGGCCAGCTGACTCGTGTGACATACATGACTATTGTGGGAGCTTTGGCATctgtaacaaaaataatttgattcgCTACCAAGAAATGTCTACAGAAACAGAAGCAGAATGCCAATCCTTATGCCTTAACACTAACAAGTGTCCCGAGTCCCAGTGCCAGGCATATTCCTATAGTGCGCCTACATATGACCGTGGTTCCTATACATGCAAGATCTGGACACGAGATTTGTCTACTGTTGTGGAGGAGTATGATCGTGGTCGTAATCTTTCTATCCTGGTCAAGAGTTCAGATATAGCACCAACAGCAAAAACATGTGAACCTTGCGCCACATATGTGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGACCCCATGTACAACAAGTTCAATTGCAACAAATCGACAGGCCACGTTAGCTTCATGATGCAGGGAGGAATATCATACCAAGTTACTCGGATCGATGAACATGCCAGAATGTTTTTCATTCAAACAGATGATTCACATTCCTGTAATTCCAGTACCAGCTATCAAAATGACACTGATTTTCCATTTAATGTAACTGAATGCATTAAAGATGTTGGAATCAAAATTAATTGGCTACCAGCACCAGAGCCGCCCTGTATTAATCTAATAGACTGCAAGAATTGGCCCCATTCAGCATGCAGAGCAACAATTGGAAGCGAAAGAAGGTGCCATTGCGATTCAAACTATAAGTGGAATGACACAATTATGCGTTGTGCCCAAGAAGAGCCGTCAAGAAACCATTCAATCCACCGACTCGCATTGATTCTTACAGTAATTCTTACGGGCATGGCAATTCTGGCAGGCACAATAGCATTTGTCATTGTGCGGAAAAAGAAAACAGTCCATAAGCTTGATCGGGCAAGCACCCGAGTTCAGGAGAGCTTGTACGAGAGCGAAAGACACGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAGGACATTGAAGGCATTGAAGTACCCTGTTATTCTTATGCAAGCATTCTAGCGGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAGAGGAGGTTATGGACCTGTGTATAAGGGAAGGTTTCCTGGAGGTCAAGATATAGCTGTAAAGAGGCTTTCAAGTGTTTCCACCCAAGGCTTACAGGAATTCAAGAATGAGGTTACTTTGATTGCCAAACTTCAGCATCGGAACCTTGTTAGACTTAGGGGATATTGCATAAAAGGagatgaaaaaattttactttatgaATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACTTTACTCCTGGATTGGCCAATGCGGTTTGAGATAATTGTAGGCATTGCGCGTGGCCTGCTCTATCTTCACCAAGACTCTAGATTGAGAGTGATTCATAGAGACTTGAAAACCAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGGGGAAAGGAAACTGAAGCAAGTACAGAGAGGGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCCTTGGATGGACTTTTTTCAATCAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTACTTGAGATTCTTAGTGGAAAAAAGAACACGGGATTCTATCAATCCAAACAAATTTCTAGCCTTTTGGGTTATGTATGTTCTTCTGTTGCATTTTTGGGTTCTGTGTATTTTTGTGATATGTTGACTTACTAA | 2577 | 0.4172 | MRTNQVLFSLLSWALCFQLCSAGDTLNAGETMSQDSGGHLVSAKLKFELGFFSLHAESGSRIEKRYFGIWYYRLKPRTVVWVANRNAPILDSTGVFQIADDGNLVVEGASKRYWSSELKGSSSSTNRTVRLLDSGNLVLVDDNSGTSYLWQSFQNPTDTFLPGMKMDASLTLTSWRDAGDPEPGNFTFKMAYIADGQNFVMHKQSQLYWTLEVVGREAEAIPLIIRYLLDNTTSHKISNKIIVYYSYENSRLLLNSSGEIQLLRWNETDEEWVKLWWGPADSCDIHDYCGSFGICNKNNLIRYQEMSTETEAECQSLCLNTNKCPESQCQAYSYSAPTYDRGSYTCKIWTRDLSTVVEEYDRGRNLSILVKSSDIAPTAKTCEPCATYVIPYPLSTGPNCGDPMYNKFNCNKSTGHVSFMMQGGISYQVTRIDEHARMFFIQTDDSHSCNSSTSYQNDTDFPFNVTECIKDVGIKINWLPAPEPPCINLIDCKNWPHSACRATIGSERRCHCDSNYKWNDTIMRCAQEEPSRNHSIHRLALILTVILTGMAILAGTIAFVIVRKKKTVHKLDRASTRVQESLYESERHVKGLIGLGSLEEKDIEGIEVPCYSYASILAATDNFSDSNKLGRGGYGPVYKGRFPGGQDIAVKRLSSVSTQGLQEFKNEVTLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFEIIVGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGLFSIKSDVFSFGVVLLEILSGKKNTGFYQSKQISSLLGYVCSSVAFLGSVYFCDMLTY | 858 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g0838 | 858 | ProSiteProfiles | Bulb-type lectin domain profile. | 17 | 152 | IPR001480 | - | |
Ssu8g0838 | 858 | ProSiteProfiles | Protein kinase domain profile. | 623 | 858 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0838 | 858 | ProSiteProfiles | PAN/Apple domain profile. | 289 | 373 | IPR003609 | - | |
Ssu8g0838 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 699 | 845 | - | - | |
Ssu8g0838 | 858 | CDD | B_lectin | 36 | 156 | IPR001480 | - | |
Ssu8g0838 | 858 | CDD | STKc_IRAK | 629 | 823 | - | - | |
Ssu8g0838 | 858 | PIRSF | SRK | 301 | 390 | IPR024171 | GO:0004674 | |
Ssu8g0838 | 858 | PIRSF | SRK | 1 | 304 | IPR024171 | GO:0004674 | |
Ssu8g0838 | 858 | PIRSF | SRK | 481 | 851 | IPR024171 | GO:0004674 | |
Ssu8g0838 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 597 | 698 | - | - | |
Ssu8g0838 | 858 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 744 | 756 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g0838 | 858 | SMART | blect_4 | 31 | 156 | IPR001480 | - | |
Ssu8g0838 | 858 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 79 | 177 | IPR036426 | - | |
Ssu8g0838 | 858 | Pfam | D-mannose binding lectin | 78 | 169 | IPR001480 | - | |
Ssu8g0838 | 858 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 304 | 840 | - | - | |
Ssu8g0838 | 858 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 15 | 299 | - | - | |
Ssu8g0838 | 858 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 304 | 840 | - | - | |
Ssu8g0838 | 858 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 15 | 299 | - | - | |
Ssu8g0838 | 858 | Pfam | S-locus glycoprotein domain | 237 | 299 | IPR000858 | GO:0048544 | |
Ssu8g0838 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 606 | 831 | IPR011009 | - | |
Ssu8g0838 | 858 | SMART | serkin_6 | 623 | 852 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g0838 | 858 | Gene3D | - | 18 | 154 | IPR036426 | - | |
Ssu8g0838 | 858 | Pfam | Protein kinase domain | 624 | 823 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g0838 | Ssu-Chr8 | 14071477 | 14075354 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g0838 | 543 | 840 | Receptor kinase-like Gene Family | AT4G05200 | 50.820 | 2.14e-98 | 320 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Ssu8g0838 | Pkinase | 1.3e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g0838 | - | - | gmx:100807185 | 1202.58 |