Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0836 ATGAGAAGTGAGGTTCTGTTCTCCTTGtcccttcttctttcttgggTCCTATGCTTCCAACTCTGTTTCGCTGCAGATACTTTGAAAGCTGGTGAGAAGATAACCCAGGACTCCGCGGGGAACCTTGTTTCATCTAACCTCACATTTGAGTTGGGCTTCTTTCCTTTACCTACTGAAAGTGATAGCAGGAGTCAAAAAAGATACTTGGGGATATGGTATTATGGGTTGGAACCACGAACAGTGGTATGGGTCGCCAATAGAGACAAGCCTGTTTTAGATTCCGGCGGAGTTTTTCGAATTGCAGAGGATGGAAATCTGGTGGTAGAAGGTGCATCAAAAAAAAGTCATTGGTCCTCTGAACTTGAAGGCTCCTCCTCGTCCACAAACAGAACAGTGAAGCTTCTAGATTCAGGGAACCTAGTACTAATGGACGATAACTTGGGAGCGAGTTACCTGTGGCAGAGCTTCCAAAACCCAACAGACACGTTTCTTCCAGGCATGAAGATGGATCCAAGATTAACATTGACTTCTTGGAAAGACGCCACTGACCCGGCACGTGGGAGCTTCACCTTTAAGCTGGATCAAGGGGCTGAGGGTCGACGCTTCGTAGTGCAAAACCAATCACAAATTTACTGGGCACTTGATGAACTAGACCCAGAAGGGATTTCCCcagtaatatttaatttgttggaCAACACCACCTGGGGTAATTTATCGtataatatttcaaacaaaacgGTCTTTATAGTGGCAGGTTACAGTTACGAGAAATCAAGGCTTCTAATGAATTATAGCGGGGAGATGCAATTTCGCCGGTGGAATGAAGACGGATGGGATACGCAGTTGTTGGGGCCAGGTGACAAGTGCGACATACGTGACTATTGCGGGAGCTTTGGCATTTGTAACAGACATAATTGGATTCGCTGCAAATGTTTGCCAGGATTCAGTCCCAGTCCCGGCCATAATCAGTATGAGGGAGAATTTCAGCTCCGAGGGTGCGTTAGAAAATCACCATCATGTATCGACACGGACGTGAAGTTCCTGAACTTAACCAACATAAAACTGGGCGACCCAGACCAACAAATGTCTACAGAAACAGAAGCAGAATGCCGATCCTCATGCCTTACCATGTGTCCTGATTACCAGTGCCAGGCATATTCATATAATACGTCCACATATGGTGATCGAGATTCCTTTACATGCAAGATCTGGACACGGCCTTTACCTACTCTTGTAGAGGAGTACGATCGTGGTCTTGATCTTTCTATCCTGGTTAAGAGATCAGATATAGAACCAACTGCAAAATCGTGTGAACCTTGCGGGACATATATAATTCCTTATCCGCTGAGTACTGGGCCAAACTGTGGAGACCCCATGTACAACAAGTTCAATTGCAACAAATCGACAGGCCATGTTAGTTTCATGATGCCGGGAGGAAAATCATACCAAGTTACTTCGATAGATGAAGGTGGTAGAATGTTTTTCATTCAAACATATGATTCAAATTGGTGTAGTTCGAGTTCCAGCTATCAAAATGGCATTGATTTTCCATTTGATGTAACTGAGTGCATTAAAGATGTTGGAATAAAAATCAATTGGCTACCAGCACCAGAGCCGCCCTGTAGTAATCTTATAGACTGCAAGAATTATTGGCCCCATTCAACATGCACAGCAAAATTGGAAGAGAAAGAAGAAGAGCCGTCAAGAAACCATTCAATCCACCGACTCGCATTGATTCTTACAGTAATTCTTATGGGCATGGCAATTCTGGCAGGCACAATAGCATTTGTCATTGTGCGGAAAAAGAAAACAGTCCATAAGCTTGATCGGGCAAGCACCCGAGTTCAGGAGAGCTTGTACGAGAGCGAAAGACACGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAGGACATTGAAGGCATTGAAGTACCCTGTTATTCTTATGCAAGCATTCTAGCGGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAGAGGAGGTTATGGACCTGTGTATAAGGTGATTGGTTCTGTTCATTTAACTTTATTAACCACCTGGCATTGA 2073 0.4293 MRSEVLFSLSLLLSWVLCFQLCFAADTLKAGEKITQDSAGNLVSSNLTFELGFFPLPTESDSRSQKRYLGIWYYGLEPRTVVWVANRDKPVLDSGGVFRIAEDGNLVVEGASKKSHWSSELEGSSSSTNRTVKLLDSGNLVLMDDNLGASYLWQSFQNPTDTFLPGMKMDPRLTLTSWKDATDPARGSFTFKLDQGAEGRRFVVQNQSQIYWALDELDPEGISPVIFNLLDNTTWGNLSYNISNKTVFIVAGYSYEKSRLLMNYSGEMQFRRWNEDGWDTQLLGPGDKCDIRDYCGSFGICNRHNWIRCKCLPGFSPSPGHNQYEGEFQLRGCVRKSPSCIDTDVKFLNLTNIKLGDPDQQMSTETEAECRSSCLTMCPDYQCQAYSYNTSTYGDRDSFTCKIWTRPLPTLVEEYDRGLDLSILVKRSDIEPTAKSCEPCGTYIIPYPLSTGPNCGDPMYNKFNCNKSTGHVSFMMPGGKSYQVTSIDEGGRMFFIQTYDSNWCSSSSSYQNGIDFPFDVTECIKDVGIKINWLPAPEPPCSNLIDCKNYWPHSTCTAKLEEKEEEPSRNHSIHRLALILTVILMGMAILAGTIAFVIVRKKKTVHKLDRASTRVQESLYESERHVKGLIGLGSLEEKDIEGIEVPCYSYASILAATDNFSDSNKLGRGGYGPVYKVIGSVHLTLLTTWH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0836 690 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 676 - -
Ssu8g0836 690 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Ssu8g0836 690 Pfam PAN-like domain 342 408 IPR003609 -
Ssu8g0836 690 Gene3D Phosphorylase Kinase; domain 1 633 683 - -
Ssu8g0836 690 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 676 - -
Ssu8g0836 690 Pfam D-mannose binding lectin 80 170 IPR001480 -
Ssu8g0836 690 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Ssu8g0836 690 CDD B_lectin 42 159 IPR001480 -
Ssu8g0836 690 ProSiteProfiles PAN/Apple domain profile. 340 428 IPR003609 -
Ssu8g0836 690 SMART ntp_6 342 425 IPR003609 -
Ssu8g0836 690 Pfam S-locus glycoprotein domain 253 317 IPR000858 GO:0048544
Ssu8g0836 690 SMART blect_4 35 159 IPR001480 -
Ssu8g0836 690 Gene3D - 21 157 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0836 Ssu-Chr8 14047977 14050999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0836 437 521 Receptor kinase-like Gene Family AT5G02070 34.783 2.03e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0836 - - gmx:100807185 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0836 8 14047977 14050999 Ssu8g0836 8 14047977 14050999 ECH
Ssu3g2205 3 71591336 71594159 Ssu8g0836 8 14047977 14050999 PCT