Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0811 ATGTCTTCCTCAAAGCTCCTTACCACTTTTCTCTTCGTCTCATTGACCTTGGCTCTCCTTCTCCAAACATCTTTTGGAGCTAACCCTCTTTTCCATTTCTGTTCAAGGTCGTCTGAGAACTTCACAGCTAATAGTCCCTATGAAATACAATTGAAAATGCTTATCATCAAACTTATTTACAAGACCTATTCAACAGGTTTTGGAGCAAGCTCAGTGGGCCATTACGAAAGCCCAAAACCATATGGGCTTGCTCTTTGTCGTGGCGATGTGTCAACCTCAGAGTGCAAAACTTGTGTCACTGAAGCAACCAAAGAAATCCTTAATCGATGTCCATACAAAAAAGGTGCCATCATATGGTATGACTACTGCATGTTCAAGTACTTGGACAACGATTTCTTTGGCAATACTGACAACACAAATAAGTTCTATCTGTGGAACGGCAATCGCGTGAGTGACCCAACAATGTTTAACTTGAAAACTAGGGAATTTGTTAGCCAACTTGCTCAAAAAGCTTATGTGAACCCGAAATTATATGCAGCTGGAGAGCTAAAGCTTGAGAAATTAGACACACTTTATGGGATGACTCAATGCACTAGAGACCTTTCTAGTGATGATTGCAAGAAGTGTCTTGATGATGCAATTAATGAATTTCCAAAATGTTGTGATGGGCAAATAGGAGGTAGGGTTGTGGATGGAAGCTGTAACTTTCGATATGAGTTATACCCGTTTGTCAAAGATTAG 741 0.4022 MSSSKLLTTFLFVSLTLALLLQTSFGANPLFHFCSRSSENFTANSPYEIQLKMLIIKLIYKTYSTGFGASSVGHYESPKPYGLALCRGDVSTSECKTCVTEATKEILNRCPYKKGAIIWYDYCMFKYLDNDFFGNTDNTNKFYLWNGNRVSDPTMFNLKTREFVSQLAQKAYVNPKLYAAGELKLEKLDTLYGMTQCTRDLSSDDCKKCLDDAINEFPKCCDGQIGGRVVDGSCNFRYELYPFVKD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0811 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 1 245 - -
Ssu8g0811 246 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Ssu8g0811 246 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Ssu8g0811 246 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Ssu8g0811 246 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 1 245 - -
Ssu8g0811 246 Gene3D - 137 243 IPR038408 -
Ssu8g0811 246 Gene3D - 27 132 IPR038408 -
Ssu8g0811 246 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0811 Ssu-Chr8 13343771 13344511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0811 3 246 Pollen Coat Proteome AT4G20670 36.047 3.61e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0811 - - gmx:100527155 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0811 8 13343771 13344511 Ssu8g0811 8 13343771 13344511 ECH