Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0760 ATGTCATTCTCACCGCCGTCGCTGGTAACGGCGGCGACCCCGACGGAGCTCCCGATCCGGCAGATTCCGGGCAGCTACGGGTGGCCGTTGCTGGGCCCCATGTCTGATCGGCTGGACTATTTCTGGTTCCAGCAGCCAGAGAGCTTCTTCAGAAAACGAATGGAGAAGCACAAGAGCACCGTGTTCCGCACCAATGTTCCTCCCTCTTTCCCCTTCTTCGTTAACGTTAACCCCAACGTTATCGCCCTCCTCGATTGCAAATCCTTCTCCCACCTCTTCGACATGGACCTCGTCGACAAGAAGGATGTTCTCGTCGGAGATTTTGTCCCCAGCGTCGCCTTCACCGGAAACATGAGGGTCGGCGTTTACCAGGACACTTCCGAGCCCCAACATTCCAAGGTGAAGGGCTACATCATGGATATCTTGAAGCGAAGCTCGGGCATATGGGTATCGGAACTAGTATCCAACCTGGACATAATGTGGGACAACATCGAAGCAACACTCTCCAAATCCACATCTGTAAGCTATCTCTTGCCGCTACAACAATTTCTCTTCACTTTCCTCTGCAAAGTCCTCGCCGGTGCAGACCCTTCCCGTGACCCCAAAATTGCGGAGTCAGGCTATGCCATGCTTGATCGTTGGCTCGCCCTCCAGATCCTACCCACTGTCAGCATCGGCATCCTCCAACCCCTCGAAGAAATCTTCCTCCATTCCTTCGCCTACCCTTTTTTCCTGGTGAGTGGAGACTACAACAACCTCTACAACTTCGTCAAACAACAAGGCAAGGAAACTATAAACAGAGGGGAAATCGGGTTTGGGTTGACCCAAGAAGAGGCCATCCACAACTTGCTCTTCGTGCTGGGCTTCAACTCCTTCGGTGGCTTTTCCATTTTCCTTCCCGCTTTGATAGGGGCCATAGCCACCGACTCCACACTGCAGGAGAAGCTGCGGAAGGAAGCCAGGGAAAGGGGCGGGTCAACTCTGACCTTTGACTCCGTCAAAGACATGGACCTCGTCCAATCCGTCGTCTACGAAACGCTGCGCATGAACCCTCCGGTTCCTCTGCAGTACGGCCGAGCCCGTAAAGATTTCCGGCTGAGTTCGCACGACTCGGCGTTCGACGTGAAGAAGGGCGAGTTGCTATGCGGCTACCAGAAGCTCGTCATGAGGGACTCCGTCATCTTCGACGAACCGGAGAGTTTCAAGCCGGACCGGTTCGCCGAGGACAAAGGGGCCCAGTTGTTGAACTACTTGTATTGGTCCAATGGGCCTCAAACTGGGTCCCCCAGCACGTCCAATAAACAGTGCGCGGGTAAGGACGTCGTGACCCTCACCGCGGCTTTGTTTGTGGCTTACCTGTTTCGCAGGTATGACTCCATCAAAGGGGATGGTAGTTCCATCACTGCCCTTCAAAAGGCCAAGTGA 1425 0.5446 MSFSPPSLVTAATPTELPIRQIPGSYGWPLLGPMSDRLDYFWFQQPESFFRKRMEKHKSTVFRTNVPPSFPFFVNVNPNVIALLDCKSFSHLFDMDLVDKKDVLVGDFVPSVAFTGNMRVGVYQDTSEPQHSKVKGYIMDILKRSSGIWVSELVSNLDIMWDNIEATLSKSTSVSYLLPLQQFLFTFLCKVLAGADPSRDPKIAESGYAMLDRWLALQILPTVSIGILQPLEEIFLHSFAYPFFLVSGDYNNLYNFVKQQGKETINRGEIGFGLTQEEAIHNLLFVLGFNSFGGFSIFLPALIGAIATDSTLQEKLRKEARERGGSTLTFDSVKDMDLVQSVVYETLRMNPPVPLQYGRARKDFRLSSHDSAFDVKKGELLCGYQKLVMRDSVIFDEPESFKPDRFAEDKGAQLLNYLYWSNGPQTGSPSTSNKQCAGKDVVTLTAALFVAYLFRRYDSIKGDGSSITALQKAK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0760 474 Pfam Cytochrome P450 289 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PANTHER CYTOCHROME P450 26 10 471 - -
Ssu8g0760 474 Gene3D Cytochrome P450 17 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 SUPERFAMILY Cytochrome P450 18 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g0760 474 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 10 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0760 Ssu-Chr8 12423588 12429465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0760 95 474 Cytochrome P450 AT4G15440 60.677 1.08e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0760 K10528 - gmx:100784395 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0760 8 12423588 12429465 Ssu8g0760 8 12423588 12429465 ECH