Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0749 ATGGATCCCTTCATCCACAAGCTCCGTCGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTGCGgtgtttttttttgtgaggAGAATCGAGTATAAGGACGTTAGAAGAGCAACGGATGGTTTCCGCAGAATCGTTTATAGCAATTCCGAAGTTTCTGCGTATGCTGCTAAGTTTGGAGATGGTGGCGGTGTTTGTTTGGTGAGAGAAGTGAAAGGTTTTGATGAAGGAAACGACAATTTTCACAGACACGTGCAATTCTTGGGGCGCTTGCGTCATCGCCATCTTCTCTCGCTCAGAGGCTTTTCTGTGGGACGCAATCACAAGAGATTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGAGCATCTAAATGACCCTTTGAAGACTCCATTAAATTGGAGGACAAGGTTACAGATAGCTAATGGCGTTGTGGCTGCACTGGAATACTTGTTTCTCTTCAGTGAACCACCAGTGTGTCAAGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAACTATCCGACTTTGGCCTTCTTACATCTGGTGGAGATTCTGTTATGATGCCATATTCAGAAGATTGTATGAAGCAGAAAAGTTGTAGGATTATTTTCCAACTTGGAGTGCTCATACTGGAACTGGTCACCGGTCAGTCTTCAGAGATGGAAGGCTCTGATTTAATTGAATGGATCCAAGAATCCCGATTTTACAATTCCATAGATAAGATGATAGACCCTGATCTTGGTAACAATTATGATTGTACGGAGCTTAAAAGTCTTCTGGCAGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTACAATTCCACAGTTATTCCGGTACGTCCAAAAGAAGATTGATATTACCCATGACTAG 909 0.4213 MDPFIHKLRRHLLAWLHRSRSGAVFFFVRRIEYKDVRRATDGFRRIVYSNSEVSAYAAKFGDGGGVCLVREVKGFDEGNDNFHRHVQFLGRLRHRHLLSLRGFSVGRNHKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPVCQVSITSSNIMLDENFTAKLSDFGLLTSGGDSVMMPYSEDCMKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRYVQKKIDITHD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0749 302 Gene3D Transferase(Phosphotransferase) domain 1 118 209 - -
Ssu8g0749 302 Gene3D Transferase(Phosphotransferase) domain 1 212 299 - -
Ssu8g0749 302 ProSiteProfiles Protein kinase domain profile. 33 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0749 302 Pfam Protein tyrosine and serine/threonine kinase 79 191 IPR001245 GO:0004672|GO:0006468
Ssu8g0749 302 SUPERFAMILY Protein kinase-like (PK-like) 55 269 IPR011009 -
Ssu8g0749 302 Gene3D Phosphorylase Kinase; domain 1 16 116 - -
Ssu8g0749 302 SMART tyrkin_6 25 290 IPR020635 GO:0004713|GO:0006468
Ssu8g0749 302 PANTHER OS01G0253100 PROTEIN 1 298 IPR045271 GO:0004714|GO:0006468
Ssu8g0749 302 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0749 Ssu-Chr8 12235824 12239517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0749 26 301 Receptor kinase-like Gene Family AT3G19300 34.114 2.79e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Ssu8g0749 PK_Tyr_Ser-Thr 8.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0749 - - gmx:100791979 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0749 8 12235824 12239517 Ssu8g0749 8 12235824 12239517 ECH