Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0723 ATGAGTTATGGTGCTACAGACCCAAATGATGTCAAAGTTTTGAATGATTTCAGAAAAGGGTTGGAGAATCCAGAGCTTTTGAAATGGCCAGAGGAGGGAGATGATCCCTGCGGTCCTCCTTCATGGCCTTATGTGTACTGCTCTGGAGATAGAGTCAATCAGATTCAGGCCAAGAATCTTGGTCTTAGAGGGTCATTGCCTCAAAACTTTAACCAACTCTCAGAACTCTACAACTTGGGTCTCCAACGCAACAACCTTAGTGGGATGTTGCCTACTTTTAGTGGATTATCCAAACTGGAATTTGCTTTCTTGGATTACAATGAATTTGATGCAATCCCAGCTGATTTTTTTGATGGACTTAGCGGCATTAGGGTCTTGTCTTTGGAAGAAAATCCACTGAATGCAAGTAGTGGATGGTCGTTTCCTATGGATTTGGAAAAATCAGGGCAATTAACTAACCTTTCTCTGGTGCATTGTAACTTGGTTGGTTCGTTGCCGGATTTTCTTGGTACATTGCCATCCCTCACAAATCTGAGGCTTTCAGGCAACAGGCTGTCTGGTGTCATTCCATCTACTTTTTCTCAATCTTCAATCCAGGTTTTGTGGTTGAACTGA 615 0.426 MSYGATDPNDVKVLNDFRKGLENPELLKWPEEGDDPCGPPSWPYVYCSGDRVNQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGMLPTFSGLSKLEFAFLDYNEFDAIPADFFDGLSGIRVLSLEENPLNASSGWSFPMDLEKSGQLTNLSLVHCNLVGSLPDFLGTLPSLTNLRLSGNRLSGVIPSTFSQSSIQVLWLN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0723 204 Pfam Leucine rich repeat N-terminal domain 8 48 IPR013210 -
Ssu8g0723 204 SMART LRR_typ_2 172 195 IPR003591 -
Ssu8g0723 204 SMART LRR_typ_2 96 119 IPR003591 -
Ssu8g0723 204 SMART LRR_typ_2 120 143 IPR003591 -
Ssu8g0723 204 SMART LRR_typ_2 73 95 IPR003591 -
Ssu8g0723 204 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 3 204 - -
Ssu8g0723 204 Gene3D Ribonuclease Inhibitor 7 204 IPR032675 -
Ssu8g0723 204 SUPERFAMILY L domain-like 6 203 - -
Ssu8g0723 204 PANTHER OSJNBA0070M12.3 PROTEIN 3 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0723 Ssu-Chr8 11822816 11823430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0723 3 189 Strubbelig Receptor Gene Family AT3G14350 32.447 1.92e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0723 - - gmx:100785090 365.54