Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0722 ATGATTTTCCTTAGACAGCTTTGGCTACATGGAAACCAGTTCACTGGGCCAATTCCACAGAATATTGGAGATCTTACTTCATTGCAGGAACTCAATCTCAATAGTAATCAACTTGTTGGCTTGATTCCGGTGTCCCTAGCACATATGGACCTTGAAATCCTAGTGTTAAATAATAACATGCTAATGGGTCCAATACCAGAATTTAAGGCTGCCAATGTTTCTTATGATAACAATTTCTTTTGTCAATCTGAGCCTGGGCATGAATGTGCTCCTCAAGTTACTGCACTGCTGGATTTTCTGGATAAGCTGAATTACCCTTCATTTCTCATTTCTGATTGGTCTGGTGATGAACCATGCACAAGTAGCACAGGGTCATGGATTGGATTGAGCTGCAATTCCGACTCAGAGGTATCTATTATCAATCTACCTAGACACAATCTAAACGGTACTCTAAGTCCCTCACTTGCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGAAGGAAACAATATAACTGGTTCAGTTCCCactaattttaccaaattaaaatctttaaggTTGTTGGATTTAAGTGATAACAATCTTAAGCCACCAATGCCAAACTTTCATAATGATGTGAAGGTTGTTATTGTGGGTAACCCTCTTCTTAATCAAACTGGAGGACCCAGTCCCATGCCTATTAGCAGCCCACCTTCACCACAGAATCCATCACAGCCTCCATCCTCTCATAAGCCACCTGTTTCAGATCAGAGTTCAAGATCAaatcaatccaaaccaaatgaCTTGAAAAGATTCAAAACAGTAGCAATAGTGGCTGGAGTTGCAGTGTTTGCTGTTGCAGTTATTTTGGTTGTTTGTCTCTTCCTATGTTGCAGGAAGAACAAAAAAGCCTCCTTGGATGCTTCAAGTTCCATTGTGGTTCACCCTCGTGATCCATCTGATCCAGATAACATGGTTAAAATTGCAGTTTCAAATGCGACTGGAAGTTTGTCGGCAAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAAACTCAAAACTCTTACATAATTGAGGATGGCAACCTTGTCATTTCTATACAAGTACTACGCAAGGTTACCAATGATTTTGCTTCAGAAAATGAGCTAGGCCGTGGTGGGTTTGGAACTGTTTACAAGGGGGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGCATGGAGCTATTAGCAGTAAGGCATTGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTCCGGCACCGGCATCTGGTGTCCTTGTTGGGGTATTCCATTGAAGGCAATGAAAGACTTTTGGTTTATGAGTATATGCCTCTTGGTGCTCTTAGCCAGCTTCTTTTTCACTGGAAAAGCTTGAAATTGGAGCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTAGATGTTGCTAGAGGGATGGAATACCTTCACAGTCTTGCCCGCCAGACCTTTATTCATCGAGACCTTAAGTCTTCTAATATTCTATTGACTGATGATTTTCGGGCAAAAGTTTCAGATTTTGGTTTGGTGAAGCATGCCCCGGATGGTGAGAAATCTGTAGTAACCAAGCTTGCTGGGACATTTGGATACCTTGCCCCTGAATACGCAGTGATGGGGAAAATCACCACAAAAGCTGATGTGTTCAGCTACGGTGTAGTGTTGATGGAACTTCTGACTGGACTGACGGCACTTGACGAGAGCCGCCCAGAGGAAAGCCGATACTTGGCAGAATGGTTTTGGCGAATTAAATCGAGCAAGGAGAAGCTTATGGCCGCCATTGATCCAGCTCTGGAAGCAACCGAAGAGACTTTTGAGAGTATAACCATTGTAGCTGAACTTGCTGGCCATTGTACTGCAAGGGAAGCACATCATAGGCCAGATATGAGCCATGTAGTCAATGTCCTGGCAGCATTAGTGGAAAAATGGCAACCGGTTGATGATGAATTAGATTACTACTCGGGCATTGACTACACAAGACCACTTCCTCAAATGTTGAAGATTTGGAAGGAGGCAGAAAGCAAAGAGTTTAGCTATGCTTCTAGTCTTGAAAACAGCAGAAGCAGTATTGCAGCTAGGCCTCCTGGGTTTGCAGACTCTTTTACTTCTGCTGATGCTCGATGA 2157 0.4219 MIFLRQLWLHGNQFTGPIPQNIGDLTSLQELNLNSNQLVGLIPVSLAHMDLEILVLNNNMLMGPIPEFKAANVSYDNNFFCQSEPGHECAPQVTALLDFLDKLNYPSFLISDWSGDEPCTSSTGSWIGLSCNSDSEVSIINLPRHNLNGTLSPSLAKLDSLLEIRLEGNNITGSVPTNFTKLKSLRLLDLSDNNLKPPMPNFHNDVKVVIVGNPLLNQTGGPSPMPISSPPSPQNPSQPPSSHKPPVSDQSSRSNQSKPNDLKRFKTVAIVAGVAVFAVAVILVVCLFLCCRKNKKASLDASSSIVVHPRDPSDPDNMVKIAVSNATGSLSAKTGTSSLSNISGETQNSYIIEDGNLVISIQVLRKVTNDFASENELGRGGFGTVYKGELEDGTKIAVKRMEHGAISSKALEEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQLLFHWKSLKLEPLSWSQRLAIALDVARGMEYLHSLARQTFIHRDLKSSNILLTDDFRAKVSDFGLVKHAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKADVFSYGVVLMELLTGLTALDESRPEESRYLAEWFWRIKSSKEKLMAAIDPALEATEETFESITIVAELAGHCTAREAHHRPDMSHVVNVLAALVEKWQPVDDELDYYSGIDYTRPLPQMLKIWKEAESKEFSYASSLENSRSSIAARPPGFADSFTSADAR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0722 718 PANTHER OSJNBA0070M12.3 PROTEIN 1 718 - -
Ssu8g0722 718 Pfam Protein tyrosine and serine/threonine kinase 374 647 IPR001245 GO:0004672|GO:0006468
Ssu8g0722 718 MobiDBLite consensus disorder prediction 219 260 - -
Ssu8g0722 718 MobiDBLite consensus disorder prediction 224 243 - -
Ssu8g0722 718 MobiDBLite consensus disorder prediction 244 260 - -
Ssu8g0722 718 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Ssu8g0722 718 Gene3D Ribonuclease Inhibitor 92 219 IPR032675 -
Ssu8g0722 718 Gene3D Transferase(Phosphotransferase) domain 1 449 664 - -
Ssu8g0722 718 Gene3D Phosphorylase Kinase; domain 1 332 448 - -
Ssu8g0722 718 SUPERFAMILY L domain-like 2 216 - -
Ssu8g0722 718 SUPERFAMILY Protein kinase-like (PK-like) 346 655 IPR011009 -
Ssu8g0722 718 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Ssu8g0722 718 ProSiteProfiles Protein kinase domain profile. 371 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0722 718 PANTHER OSJNBA0070M12.3 PROTEIN 1 718 - -
Ssu8g0722 718 CDD STKc_IRAK 377 647 - -
Ssu8g0722 718 SMART serkin_6 371 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0722 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Ssu8g0722 718 MobiDBLite consensus disorder prediction 696 718 - -
Ssu8g0722 718 Pfam Leucine rich repeat N-terminal domain 91 132 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0722 Ssu-Chr8 11820179 11822769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0722 113 670 Receptor kinase-like Gene Family AT1G51860 34.392 5.17e-75 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ssu8g0722 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0722 - - gmx:100785090 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0722 8 11820179 11822769 Ssu8g0722 8 11820179 11822769 ECH