Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0715 ATGTCTTCCAACAAGAGAAGGCTCATGAGAACCCTACTCAAAGCAAATGGAGGCTGTGGGTGTAGCAAACTGAAATCGGCTGATGTATTCGAGCCCAACCCAAAACCCAAAATCTCCATTTACCAAAACACAAACCCTAGCAGCCTCAACTCATCCACCACTTCCGGCGATCGCAACGGCGACGACGACGGAGACTTCACCTCCACCACCATCTCCGAAGCCGACACACATCAAGACCAAAACAACAAGAACAATGGCACGCCAAAGCCGAGCCCAAAACTCGTGGACAGCATCGCCGTTGAGAAGGACTCGAAGGACCCGCATAAGGATTTTCGGGATTCCATGGTCCAAATGATCTTCGAGAGAGAGATCTACACAGAAACCGATCTTCAAGAGCTTCTCGAGTGCTTCCTTCAGCTGAACGCCACGCGTCATCACGAAATCATCGTTCAAGCCTTCATGGAGATCTGCGAAGAAGCGTTCCCGAAGAAGAATATCAGTGGTGGCGCTCCTGAACCGTGCCGCAGGAACCAGATCATTCGAAAGAGTCGGTGA 555 0.5099 MSSNKRRLMRTLLKANGGCGCSKLKSADVFEPNPKPKISIYQNTNPSSLNSSTTSGDRNGDDDGDFTSTTISEADTHQDQNNKNNGTPKPSPKLVDSIAVEKDSKDPHKDFRDSMVQMIFEREIYTETDLQELLECFLQLNATRHHEIIVQAFMEICEEAFPKKNISGGAPEPCRRNQIIRKSR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0715 184 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 98 157 IPR006458 -
Ssu8g0715 184 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 175 - -
Ssu8g0715 184 MobiDBLite consensus disorder prediction 27 94 - -
Ssu8g0715 184 MobiDBLite consensus disorder prediction 37 57 - -
Ssu8g0715 184 MobiDBLite consensus disorder prediction 65 91 - -
Ssu8g0715 184 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Ssu8g0715 184 Pfam Transcriptional repressor, ovate 104 159 IPR006458 -
Ssu8g0715 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 175 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0715 Ssu-Chr8 11710327 11710881 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu8g0715 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0715 - - gmx:102670259 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0715 8 11710327 11710881 Ssu8g0715 8 11710327 11710881 ECH
Ssu8g0715 8 11710327 11710881 Ssu3g2315 3 73767676 73768404 PCT