Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0685 ATGGCGAGCCACAGAATAGGAGAACTTGGTTTGTCTGAGTCAGGGCCTTCAAGTCATCACATCCCTTATGGAGTGCTTCATGGGATTAATACTCCTGCATCAAGCTTAATCAATCAAGGATCAGTTTTTGATTTTGGGGAGCTGGAAGAAGCAATTGTGCTGCATGGAGTTAAGGGAAGAAATGATGAGGGCAAAGGATCTTTATTCACAGCCAGACCTGCAGCTACACTGGAAATGTTCCCCTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGGTGATTCAAAGTCAGGAGGGGAAAGCACTGATTCAGCTCTTTCAAGCAAAGCGGAGCCCCCCTTTGAGGCAGAATCTCCCATAAGTAAAAAGGCATTTTCTTCAGATCATCAGGCTTTTGATCAGCAGCATCTGCAGCATAGACAGCAACTTCAACAGGAGATGGCAACTGAGGCCCCAAGAACAGCCTCTTCACAGAATCAATCAGTAGCCAAATCACCTCAAGAAAAGAGAAAGGGAGCTGGTTCTACATCAGAGAAACCACTTGATGCAAAgACATTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTTACCCAGCTAGAACAAGAACTTCAAAGAGCACACTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAAGTAATGTAAGCTCTGGAGCCGCAATGTTTGACATGGAATATGCAAGATGGCTAGAAGAAGACCTCCGTCTGATGGGGGAGCTCCGGAACGGGTTGCAGGCACCGTTATCAGATAGTGATCTGAGAGTGATGGTGGATGGATATATTTCACACTATGATGAAATTTTCAGGCTCAAGGGAGTGGCTGCAAAATCAGATGTGTTCCACCTTATCAATGGCATGTGGACTTCCCATGCTGAACGCTGCTTCCTCTGGATTGGTGGTTTTAGGCCCTCTGATCTCATCACGATGCTGATCCAACAGTTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCCTGCGGCATTCCTCACAGCAAGCAGAAGAGGCTCTCTCTCAGGGCCTTGAGCAGTTGCAGCAGTCTCTGGTGGACACAATAGCTGGAGGCCCAGTTGCCGATGGTGTGCAACAAATGGTCGTTGCCATGGGCAAACTTGCCAATCTTGAAGGGTTTGTTCGCCagGCTGATAATCTGAGGCAACAGACTCTTCATCAGTTATGTCGATTACTGACAGTTCGTCAAGCAGCAAAGTGCTTTATTGTTATTGGAGAGTATTATGGACGTCTTCGAGCCCTTAGTTCCCTTTGGGCATCAAGACCACGAGaGACCTTAATCAGCGACGATAACTCATGCCAAACAACCACGGAAATGCAAATAGTCCAACCTTCTCAGAATCATTTCTCTAGTTTCTGA 1461 0.4682 MASHRIGELGLSESGPSSHHIPYGVLHGINTPASSLINQGSVFDFGELEEAIVLHGVKGRNDEGKGSLFTARPAATLEMFPSWPMRFQQTPRGDSKSGGESTDSALSSKAEPPFEAESPISKKAFSSDHQAFDQQHLQHRQQLQQEMATEAPRTASSQNQSVAKSPQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRAHSQGLFVDCGGVGSNVSSGAAMFDMEYARWLEEDLRLMGELRNGLQAPLSDSDLRVMVDGYISHYDEIFRLKGVAAKSDVFHLINGMWTSHAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVADGVQQMVVAMGKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAAKCFIVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTEMQIVQPSQNHFSSF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0685 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Ssu8g0685 486 PANTHER TRANSCRIPTION FACTOR TGA9 64 465 - -
Ssu8g0685 486 PANTHER TRANSCRIPTION FACTOR TGA9 64 465 - -
Ssu8g0685 486 CDD bZIP_HBP1b-like 184 234 - -
Ssu8g0685 486 Pfam bZIP transcription factor 183 224 IPR004827 GO:0003700|GO:0006355
Ssu8g0685 486 MobiDBLite consensus disorder prediction 123 166 - -
Ssu8g0685 486 SMART brlzneu 180 245 IPR004827 GO:0003700|GO:0006355
Ssu8g0685 486 MobiDBLite consensus disorder prediction 80 186 - -
Ssu8g0685 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Ssu8g0685 486 SUPERFAMILY Leucine zipper domain 184 227 IPR046347 GO:0003700|GO:0006355
Ssu8g0685 486 Coils Coil 203 230 - -
Ssu8g0685 486 ProSiteProfiles DOG1 domain profile. 247 455 IPR025422 GO:0006351|GO:0043565
Ssu8g0685 486 Gene3D - 183 231 - -
Ssu8g0685 486 MobiDBLite consensus disorder prediction 88 108 - -
Ssu8g0685 486 MobiDBLite consensus disorder prediction 171 186 - -
Ssu8g0685 486 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0685 Ssu-Chr8 11295489 11302975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0685 125 486 bZIP Transcription Factor Family AT1G08320 69.421 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu8g0685 DOG1 4.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0685 K14431 - gmx:100775461 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0685 8 11295489 11302975 Ssu8g0685 8 11295489 11302975 ECH