Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0597 ATGTTCAAACCCCAAATCGAACTGGCCCCATCCATTATTCGCACCTATAAAGCGCCCTTCACCTTCTCCCGcactcttcttcttcattctcctATGTGCAAAACAAAGATGGCCACCAACGCGGCCAGTCCCACTCGAACCCCTCGGTCCAAACAACGGGCCACCCAAAGCCCATCGTCAAGGCCCACTCCCGGGCCCACCACTTCTCTCTCCGACAAACCCTCCACCTCGTACGGCAGCACCAGCGCACACTACAGCGGCTCCACCGGCTACAGACTCTCCTCCGACACCTCCATTTCGAGCCGCACCTCCCTTACCTCCCTCCGCGACATGCTTCCGGAAAACCCCAACATCTACGACTTCGCCGAAATCCGCTCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCATGCTGGCGCTGCACCCTCCGCGGCGCCGACGTCATTGTCTTCCAGCGCAAGTTCCGCCGCAAGCTCCAAACCTCGCAGCTCCAAAACCTCCTCTCCGTCATCTGCCGGAGCCACCACGTCAGCATCATCAAGCTCCTCGGCTCGTCCGTCTCCGGCGACCACATCTACCTCGTCTACGAGTTCGTCAGCGGCGCGAGCCTCGCCGATTGCCTCCGCAACAAGAACAACGCGCACTTCACGGTGCTCTCCACGTGGATGTCGAGAATGCAGGTCGCCACGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGCTTGAACATCAGCCTCGTGCATAATCACATCAAAAGCAGCGGAATCATCGTCACCGAACCTTCCTTCAACGCTAGGGTTTGCCACTTCGGCGCCGCGCAGCTCTGCGGCGAAATCGAGATCGAGGACGCACGATTCGGCGAGATTACCGAGGAACCCCCGTCGCCGGCGAGATCCAAGCAATTCGAGGGCGTGCGGGAGTACATGGCGCCGGAATTTAAAGCCTCCGGCATGGCGACGCAGAAGTCCGACGTGTACGCTTTCGGAGTGGTGATGTTAGAGCTATTGTCCGGGGAAGAGCCGTTGAAGTTTAAGTACGACGAGAAGACGCGCGGTTTCGTGAGGACGTCGGTGATCGACGCGGCCCTCGCCGCCGTGGACGGCGGCGGGGGTAGCGTGGAAGGGAAGCTGAGGAGGTGGGTGGATCGGAGATTGAAAGATTCCTTCCCTGTGGATGTGGCGGAGAAGTTGACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAGAGACCCAACATGGGACGCGTCGCAGGCAAGATCTCCAAGTTTTATTTGACGTCGAGGAACTGGTCTGACAGTATTAAGATGCCTGATATTACTGTTTCGTTGGGTCCTCGATAA 1368 0.5782 MFKPQIELAPSIIRTYKAPFTFSRTLLLHSPMCKTKMATNAASPTRTPRSKQRATQSPSSRPTPGPTTSLSDKPSTSYGSTSAHYSGSTGYRLSSDTSISSRTSLTSLRDMLPENPNIYDFAEIRSATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRKLQTSQLQNLLSVICRSHHVSIIKLLGSSVSGDHIYLVYEFVSGASLADCLRNKNNAHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNISLVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEIEIEDARFGEITEEPPSPARSKQFEGVREYMAPEFKASGMATQKSDVYAFGVVMLELLSGEEPLKFKYDEKTRGFVRTSVIDAALAAVDGGGGSVEGKLRRWVDRRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRNWSDSIKMPDITVSLGPR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0597 455 ProSiteProfiles Protein kinase domain profile. 78 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0597 455 Gene3D Transferase(Phosphotransferase) domain 1 204 444 - -
Ssu8g0597 455 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 32 455 - -
Ssu8g0597 455 Pfam Protein kinase domain 160 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g0597 455 PANTHER OS09G0572100 PROTEIN 32 455 - -
Ssu8g0597 455 Gene3D Phosphorylase Kinase; domain 1 93 202 - -
Ssu8g0597 455 MobiDBLite consensus disorder prediction 37 97 - -
Ssu8g0597 455 SUPERFAMILY Protein kinase-like (PK-like) 139 425 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0597 Ssu-Chr8 9674593 9675960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0597 114 443 Receptor kinase-like Gene Family AT1G51940 32.036 2.51e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ssu8g0597 Pkinase 4.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0597 - - gmx:100792694 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0597 8 9674593 9675960 Ssu8g0597 8 9674593 9675960 ECH